Job Description P33643 Confidence 100.00% Date Thu Jan 5 11:52:28 GMT 2012 Rank 7 Aligned Residues 203 % Identity 20% Template c1vioA_ PDB info PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridylate synthase Resolution 1.59 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	D	Q	A	L	A	E	M	F	P	D	Y	S	R	S	R	I	K	E	W	I	L	D	Q	R	V	L	V	N	G	K	V	C	D	K	P	K	E	K	V	L	G	G	E	Q	V	A	I	N	A	E	I	E	E	E	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D	E	D	I	I	I	I	N
Query Conservation
Alig confidence													.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	L	D	K	F	I	A	E	N	V	.	G	L	T	R	S	Q	A	T	K	A	I	R	Q	S	A	V	K	I	N	G	E	I	V	K	S	G	S	V	Q	I	S	Q	E	D	E	I	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	E	L	L	T	W	I	E	E	G	Q	Y	F	M	L	N
Template Known Secondary structure													.	T												T	T					T	T						T	T					T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S	S
Template Predicted Secondary structure													.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.														50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T	R	E	Y	E	A	V	A	I	G
Query Conservation
Alig confidence													.	.	.													.	.	.	.	.																															.	.
Template Conservation													.	.	.													.	.	.	.	.																															.	.
Template Sequence		K	P	Q	G	C	V	C	S	N	D	D	.	.	.	Y	P	T	I	Y	Q	F	F	D	Y	P	L	.	.	.	.	.	A	G	K	L	H	S	A	G	R	L	D	V	D	T	T	G	L	V	L	L	T	D	D	G	Q	W	S	H	R	I	.	.	T	S	P	K	H	H	C	E	K	T	Y	L	V	T	L	A	D
Template Known Secondary structure				T	T		B	S	S				.	.	.			B	G	G	G	G	S		T	T	G	.	.	.	.	.	G	G	G				S	S				T	T									S									.	.			T	T	S											S	S
Template Predicted Secondary structure													.	.	.													.	.	.	.	.																															.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		H	M	T	A	G	G	T	V	D	E	P	I	S	R	H	P	T	K	R	T	H	M	A	V	H	P	M	G	K	P	A	V	T	H	Y	R	I	M	E	H	F	R	V	H	T	R	L	R	L	R	L	E	T	G	R	T	H	Q	I	R	V	H	M	A	H	I	T	H	P	L	V	G	D	P	.	.	V	Y	G	G
Query Conservation																																																																												.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																					.																															.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		P	V	E	E	N	Y	S	A	A	C	A	E	G	.	.	.	.	.	.	.	.	.	.	I	L	L	R	G	E	K	E	P	T	K	P	A	K	L	E	I	L	D	D	.	Y	N	V	N	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A	L	G	N	K	V	V	G	L	H	R	W	K	I	G	D
Template Known Secondary structure					T	T									.	.	.	.	.	.	.	.	.	.				T	T		S	S											S	S	.	S							S				T	T									T	T												T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.											.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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