Return to main results Retrieve Phyre Job Id

Job DescriptionP31665
Confidence27.57%DateThu Jan 5 11:48:27 GMT 2012
Rank104Aligned Residues42
% Identity17%Templated1j5ya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270...... ...280.........290.........300
Predicted Secondary structure 

...






Query SS confidence 

















. . .























Query Sequence  QGRQEVSQEFAQRLLSKG. . . MSREDVAEMANLPLAEIDKVINLI
Query Conservation 

  
   
    

  
...   
 

  
 

 


  
   
Alig confidence 

















...























Template Conservation 
  
 

   

  
      

  


  
 

 


 


  
Template Sequence  KTVRQERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYL
Template Known Secondary structure 
SS
B
TS
Template Predicted Secondary structure 









Template SS confidence 












































   4.....10.........20.........30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions