Return to main results Retrieve Phyre Job Id

Job DescriptionP31665
Confidence25.41%DateThu Jan 5 11:48:27 GMT 2012
Rank121Aligned Residues38
% Identity16%Templatec3h0gP_
PDB info PDB header:transcriptionChain: P: PDB Molecule:dna-directed rna polymerase ii subunit rpb4; PDBTitle: rna polymerase ii from schizosaccharomyces pombe
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300
Predicted Secondary structure 








Query SS confidence 





































Query Sequence  EVSQEFAQRLLSKGMSREDVAEMANLPLAEIDKVINLI
Query Conservation 
   
    

  
   
 

  
 

 


  
   
Alig confidence 





































Template Conservation    
   
  

   
  

 
 
 

 
   






Template Sequence  AEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLI
Template Known Secondary structure 



S





Template Predicted Secondary structure 










Template SS confidence 





































   71........80.........90.........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions