Return to main results Retrieve Phyre Job Id

Job DescriptionP31665
Confidence75.15%DateThu Jan 5 11:48:27 GMT 2012
Rank20Aligned Residues37
% Identity11%Templatec2q0oA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:probable transcriptional activator protein trar; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290.........300
Predicted Secondary structure 








Query SS confidence 




































Query Sequence  VSQEFAQRLLSKGMSREDVAEMANLPLAEIDKVINLI
Query Conservation     
    

  
   
 

  
 

 


  
   
Alig confidence 




































Template Conservation   

 


 


 
 
  


  
 

  

  

  
Template Sequence  PREMLCLVWASKGKTASVTANLTGINARTVQHYLDKA
Template Known Secondary structure  TT




Template Predicted Secondary structure 






Template SS confidence 




































   178.180.........190.........200.........210....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions