Job Description P31665 Confidence 39.52% Date Thu Jan 5 11:48:27 GMT 2012 Rank 56 Aligned Residues 39 % Identity 28% Template c2k9lA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		Q	E	V	S	Q	E	F	A	Q	R	L	L	S	K	G	M	.	.	.	S	R	E	D	V	A	E	M	A	N	L	P	L	A	E	I	D	K	V	I	N	L	I
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		Q	E	L	A	L	E	L	L	N	Y	L	N	E	K	G	F	L	S	K	S	V	E	E	I	S	D	V	L	R	C	S	V	E	E	L	E	K	V	R	Q	K	V
Template Known Secondary structure													T	T	S	S	T	T												T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions