Return to main results Retrieve Phyre Job Id

Job DescriptionP31665
Confidence76.96%DateThu Jan 5 11:48:27 GMT 2012
Rank14Aligned Residues33
% Identity30%Templatec1q1hA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription factor e; PDBTitle: an extended winged helix domain in general transcription2 factor e/iie alpha
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270...... ...280.........290........
Predicted Secondary structure 

..




Query SS confidence 










. .





















Query Sequence  QEFAQRLLSKG. . MSREDVAEMANLPLAEIDKVIN
Query Conservation   
    

  
..   
 

  
 

 


  
  
Alig confidence 










..





















Template Conservation    
   
     
 






  




 


 

Template Sequence  IDVLRILLDKGTEMTDEEIANQLNIKVNDVRKKLN
Template Known Secondary structure 
S
B
TTTS
Template Predicted Secondary structure 








Template SS confidence 


































   21........30.........40.........50.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions