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Job DescriptionP77397
Confidence99.53%DateThu Jan 5 12:28:35 GMT 2012
Rank41Aligned Residues242
% Identity21%Templated1reoa1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution2.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50......... 60.........70.
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Query Sequence  QPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVVEKLDKLIDYPRAIGI. . . . . . . . . . . . . . . . . DDEALRTMQSVG
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Template Sequence  LKATSNPKHVVVVGAGMSGLSAAYVLSGAGHQVTVLEASERAGGRVRTYRNDKEDWYANLGPMRLPEKHRIVREYIRKFG
Template Known Secondary structure  S


SS



STT

SSSSS
TT

TTTTSS


TT
TT
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   72.......80.........90.........100.
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Query Sequence  LVDDVLPHTTPWHAMRFLTPKGRCFADIQP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                                                  
Template Sequence  LQLNEFSQENDNAWYFIKNIRKRVGEVKKDPGVLKYPVKPSEEGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTK
Template Known Secondary structure 



S

TTSTT
GGGG




GGGTT

TS
GGGSB
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   102.......110.........120.........130.........140.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MTDEFGWPRRNAFIQPQVDAVMLEGVSRFPNVRCLFSRELEAFS
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Template Conservation                                                                    .        
  
 
Template Sequence  EYLLKEGNLSPGAVDMIGDLMNEDSGYYVSFPESLRHDDIFAYEKRFDEIVGGMDKLPTSMYRAIE. EKVHLNAQVIKIQ
Template Known Secondary structure  TS


T
GGGTTSBTT


TT
TTTG.GGSS
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   187..190.........200.........210.........220.........230.........240.........250.. .......260.....
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  QQDDEVTLHLKTAEGQREIVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDPVRPYVSA
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Template Conservation                        
 

              
 
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Template Sequence  KNAEKVTVVYQTPAKEMASVTADYVIVCTTSRATRRIKFEPPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
SSS
S
S
TSS

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   266...270.........280.........290.........300........
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  ALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYTHNARLAQRFRIDRVLLAGDAAHIMPVWQG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . PPKKAHALRSVFTPY. . . . . . . . . . . QFQHFSESLTASVDRIYFAGEHTAEAHGWID
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TT...........

BTT
SGGGSSSTT
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   309310.........320... ......330.........340.........350....
 
   306...310.........320..
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Query Sequence  QGYNSGMRDAFNLAWKL
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Template Sequence  STIKSGLRAARDVNRAS
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   468.470.........480....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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