 |
Job Description | P77397 | Confidence | 98.91% | Date | Thu Jan 5 12:28:35 GMT 2012 |
Rank | 116 | Aligned Residues | 61 |
% Identity | 31% | Template | c3rhaA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:putrescine oxidase; |
PDBTitle: the crystal structure of oxidoreductase from arthrobacter aurescens
|
Resolution | 2.05 Å |
|
 |
  |   |
12 | . | . | |
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
| . |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | H | . |
S | V | Q | V | A | I | A | G | A | G | P | V | G | L | M | M | A | N | Y | L | G | Q | M | G | I | D | V | L | V | V | E | K | L | D | K | L | I | D | Y | P | R | A | I | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | E | A | L | R | T | M | Q | S | V | G | L |
Query Conservation |   |
  |   |   | . |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |
|   |   |
|
|
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
Template Sequence |   |
M | Q | N | L | D | R | D | V | V | I | V | G | A | G | P | S | G | L | T | A | A | R | E | L | K | K | A | G | L | S | V | A | V | L | E | A | R | D | R | V | G | G | R | T | W | T | D | T | I | D | G | A | M | L | E | I | G | G | Q | W | V | S | P | D | Q | T | V | L | M | E | L | L | D | E | L | G | L |
Template Known Secondary structure |   |
|  |  |  |  |
| S |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S | S | S | S | S |
| T | T |
|
|  |  |  |  | T | T |  |  |  |  |
| S |
|
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|