Job Description P77397 Confidence 99.56% Date Thu Jan 5 12:28:35 GMT 2012 Rank 39 Aligned Residues 297 % Identity 14% Template c3ka7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of an oxidoreductase from methanosarcina2 mazei. northeast structural genomics consortium target id3 mar208 Resolution 1.80 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	V	A	I	A	G	A	G	P	V	G	L	M	M	A	N	Y	L	G	Q	M	G	I	D	V	L	V	V	E	K	L	D	K	L	I	D	Y	P	R	A	I	G	I	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	T	M	Q	S	V	G	L	V	D	D	V	L	P
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	K	T	V	V	I	G	A	G	L	G	G	L	L	S	A	A	R	L	S	K	A	G	H	E	V	E	V	F	E	R	L	P	I	T	G	G	R	F	T	N	L	S	Y	K	G	F	Q	L	S	S	G	A	F	H	X	L	P	N	G	P	G	G	P	L	A	C	F	L	K	E	V	E	A	S	V	N	I	V	R
Template Known Secondary structure										B													T	T								S	S	S	S	S	B	T	T	S	S					T	T					S	S	S		S		B	T	T	G	G	G	S									T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	T	P	W	H	A	M	R	F	L	T	P	K	G	R	C	F	A	D	I	Q	P	M	T	D	E	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	X	T	T	V	R	V	P	L	K	K	G	N	P	D	Y	V	K	G	F	K	D	I	S	F	N	D	F	P	S	L	L	S	Y	K	D	R	X	K	I	A	L	L	I	V	S	T	R	K	N	R	P	S	G	S	S	L	Q	A	W	I	K	S	Q	V	S	D	E	W	L	I	K	F	A	D	S	F	C	G
Template Known Secondary structure											S	S	T	T			S	S	T	T							G	G	G	G	G	G	G	S															T	T	T	S				S	S	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																												108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	R	R	N	A	F	I	Q	P	Q	V	D	A	V	M	L	E	G	V	S	R	F	P	N	V	R	C	L	F	S	R	E	L	E	A	F	S	Q	Q	D	D	E	V	T	L	H	L	K	T	A	E	G	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																											.	.	.
Template Conservation																																																				.																											.	.	.
Template Sequence		W	A	L	S	L	K	S	D	E	V	P	V	E	E	V	F	E	I	I	E	N	X	Y	R	F	G	G	T	G	I	P	E	G	G	C	K	G	I	I	D	A	L	E	T	V	I	S	A	N	G	.	G	K	I	H	T	G	Q	E	V	S	K	I	L	I	E	N	G	K	A	A	G	I	I	A	D	D	.	.	.
Template Known Secondary structure					S	S		G	G	G	S	B																S					T	T	S															T	T	.						S										T	T								T	T	.	.	.
Template Predicted Secondary structure																																																				.																											.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.											.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Query Sequence		R	E	I	V	K	A	Q	W	L	V	A	C	D	G	G	A	S	F	V	R	R	T	L	N	V	P	F	E	G	K	T	A	.	.	.	.	.	.	.	.	.	.	P	N	Q	W	I	V	V	D	I	A	N	D	P	L	S	T	P	H	I	Y	L	C	C	D	P	V	R	P	Y	V	S	A	A	L	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Alig confidence		.																																.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation		.
Template Sequence		.	R	I	H	D	A	D	L	V	I	S	N	L	G	H	A	A	T	A	V	L	C	S	E	A	L	S	K	E	A	D	A	A	Y	F	K	X	V	G	T	L	Q	P	S	A	G	I	K	I	C	L	A	A	D	E	P	L	V	G	H	T	G	V	L	L	T	P	Y	T	R	R	I	N	G	V	N	E	V	T	Q
Template Known Secondary structure		.						S						S									T	T	T	T			T	T	T	T													B										S	S		S	S		S	S	S						S	S	S	S							G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
										228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.									.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	H	A	V	R	R	F	E	F	M	V	M	P	G	E	T	E	E	Q	L	R	E	P	Q	N	M	R	K	L	L	S	K	V	L	P	N	P	D	N	V	E	L	I	R	.	.	.	.	.	.	.	.	Q	R	V	Y	T	H	N	A	R	L	A	Q	R	F	R	I	D	R	V	L
Query Conservation		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	P	E	L	A	P	P	G	K	H	L	T	X	C	H	Q	Y	V	A	P	E	N	V	K	N	L	E	S	E	I	E	X	G	L	E	D	L	K	E	I	F	P	G	K	R	Y	E	V	L	L	I	Q	S	Y	H	D	E	W	P	V	N	R	A	A	S	G	T	D	P	G	N	E	T	P	F	S	G	L	Y
Template Known Secondary structure		T		G	G	G	S		T	T												G	G	G	G	G	G																S	T	T												B	T	T	B		S	B	S	S		T	T					S	B		S	S	B	T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	D	A	A	H	I	M	P	V	W	Q	G	Q	G	Y	N	S	G	M	R	D	A	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	G	D	G	A	K	G	K	G	G	I	E	V	E	G	V	A	L	G	V	X	S	V	X	E
Template Known Secondary structure				S	T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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