Job Description P77397 Confidence 99.39% Date Thu Jan 5 12:28:35 GMT 2012 Rank 55 Aligned Residues 252 % Identity 13% Template c3f8rD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:thioredoxin reductase (trxb-3); PDBTitle: crystal structure of sulfolobus solfataricus thioredoxin2 reductase b3 in complex with two nadp molecules Resolution 1.95 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	V	Q	V	A	I	A	G	A	G	P	V	G	L	M	M	A	N	Y	L	G	Q	M	G	I	D	V	L	V	V	E	K	L	D	K	L	I	D	Y	P	R	A	I	G	I	D	D	E	A	L	R	T	M	Q	S	V	G	L	V	D	D	V	L	P	H	T	T	P	W	H	A	M	R	F	L	T	P	K	G
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	F	D	V	I	I	V	G	L	G	P	A	A	Y	G	A	A	L	Y	S	A	R	Y	M	L	K	T	L	V	I	G	E	T	P	G	G	Q	L	T	E	A	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S													T	T								S	S	T	T	G	G	G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	F	A	D	I	Q	P	M	T	D	E	F	G	W	P	R	R	N	A	F	I	Q	P	Q	V	D	A	V	M	L	E	G	V	S	R	F	P	N	V	R	C	L	F	S	R	E	L	E	A	F	S	Q	Q	D	D	E	V	T	L	H	L	K	T	A	E	G	Q	R	E	I	V	K	A	Q	W	L	V	A	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																											.																										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																											.																										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	D	Y	L	G	L	I	E	I	Q	A	S	D	M	I	K	V	F	N	K	H	I	E	K	Y	E	.	V	P	V	L	L	D	I	V	E	K	I	E	N	R	G	D	E	F	V	V	K	T	K	R	K	.	.	.	.	.	G	E	F	K	A	D	S	V	I	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			S	T	T	S	T	T																T	T	T	.						S									S	S	S						S	S	S	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																											.																										.	.	.	.	.
Template SS confidence
														59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																																					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		D	G	G	A	S	F	V	R	R	T	L	N	V	P	F	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	P	N	Q	W	I	V	V	D	I	A	N	D	P	L	S	T	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	V	K	R	R	K	L	G	V	P	G	E	Q	E	F	A	G	R	G	I	S	Y	C	S	V	C	D	A	P	L	F	K	N	R	V	V	A	V	I	G	G	G	D	S	A	L	E	G	A	E	I	L	S	S	Y	S	T	K	V	Y	L	I	H	R	R	D	T	F	K	A	Q	P	I	Y	V	E	T	V	K
Template Known Secondary structure												T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T								S	S											T	T	T		S							S	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	I	Y	L	C	C	D	P	V	R	P	Y	V	S	A	A	L	P	H	A	V	R	R	F	E	F	M	V	M	P	G	E	T	E	E	Q	L	R	E	P	Q	N	M	R	K	L	L	S	K	V	L	P	N	P	D	N	V	E	L	I	R	Q	R	V	Y	T	H	N	A	R	L	A	Q	R	F	R	I	D	R
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.
Template Sequence		K	K	P	N	V	E	F	V	L	N	S	V	V	K	E	I	K	G	D	K	V	V	K	Q	V	V	V	E	N	L	K	V	N	G	V	F	I	E	I	G	F	D	P	P	T	D	F	A	K	S	N	G	I	E	T	D	T	N	G	Y	I	K	V	D	E	W	M	.	.	.	.	.	.	.	R	T	S	V	P	G
Template Known Secondary structure		T		T	T						S									S	S	S																														T	T			B		T	T	S	S	B				T	T		.	.	.	.	.	.	.	B		S	S	T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	A	G	D	A	A	H	I	M	P	V	W	Q	G	Q	G	Y	N	S	G	M	R	D	A	F	N	L	A	W	K	L	A	L	V	I	Q
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		V	F	A	A	G	D	C	T	S	.	.	A	W	L	G	F	R	Q	V	I	T	A	V	A	Q	G	A	V	A	A	T	S	A	Y	R	Y	V	T
Template Known Secondary structure						S	T	T	B	S	.	.	T	T	T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions