Job Description P77397 Confidence 99.33% Date Thu Jan 5 12:28:35 GMT 2012 Rank 66 Aligned Residues 151 % Identity 17% Template c3cesB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:trna uridine 5-carboxymethylaminomethyl modification enzyme PDBTitle: crystal structure of e.coli mnmg (gida), a highly-conserved trna2 modifying enzyme Resolution 2.41 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.																.
Query SS confidence																																																					.	.	.	.	.																.
Query Sequence		H	P	D	I	Q	P	A	V	N	H	S	V	Q	V	A	I	A	G	A	G	P	V	G	L	M	M	A	N	Y	L	G	Q	M	G	I	D	V	L	V	V	E	K	L	D	K	L	I	D	Y	P	R	.	.	.	.	.	A	I	G	I	D	D	E	A	L	R	T	M	Q	S	V	.	G	L	V	D	D	V	L	P
Query Conservation																																																					.	.	.	.	.																.
Alig confidence							.	.	.	.																																											.	.	.	.	.																.
Template Conservation							.	.	.	.
Template Sequence		H	M	F	Y	P	.	.	.	.	D	P	F	D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	M	G	Q	Q	T	L	L	L	T	H	N	I	D	T	L	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	E	V	D	A	L	G	G	L	M	A	K	A	I	D
Template Known Secondary structure						S	.	.	.	.	S			S							S													T	T								S		G	G	G	T	T			S	S		S					T	T											T	T		S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		0	.	.	.	.					.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	T	P	W	H	A	M	R	F	L	T	P	K	G	R	C	F	A	D	I	Q	P	M	T	D	E	F	G	W	P	R	R	N	A	F	I	Q	P	Q	V	D	A	V	M	L	E	G	V	S	R	F	P	N	V	R	C	L	F	S	R	E	L	E	A	F	S	Q	Q	D	D	E	V	T	L	H	L	K	T	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	.	.	.	.	.	.	.	.	.	.	.	.	G	I	Q	F	R	I	L	N	A	S	K	G	P	A	V	R	A	T	R	A	Q	A	D	R	V	L	Y	R	Q	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	Q	Q	A	V	E	D	L	I	V	E	N	D	R	V	V	G	A	V	T	Q	M	G
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.								S	T	T	S		T	T	S																						T		T	T														S	S	S	B							T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.													.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	Q	R	E	I	V	K	A	Q	W	L	V	A	C	D	G
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	K	F	R	A	K	A	V	V	L	T	V	G
Template Known Secondary structure		.	.	.	.						S							S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						144	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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