Job Description P77397 Confidence 99.97% Date Thu Jan 5 12:28:35 GMT 2012 Rank 29 Aligned Residues 341 % Identity 13% Template c2e4gB_ PDB info PDB header:biosynthetic protein, flavoprotein Chain: B: PDB Molecule:tryptophan halogenase; PDBTitle: rebh with bound l-trp Resolution 2.08 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																							.	.	.																															.						.
Query SS confidence																							.	.	.																															.						.
Query Sequence		Q	V	A	I	A	G	A	G	P	V	G	L	M	M	A	N	Y	L	G	Q	M	.	.	.	G	I	D	V	L	V	V	E	K	L	D	K	L	I	D	Y	P	R	A	I	G	I	D	D	E	A	L	R	T	M	.	Q	S	V	G	L	.	V	D	D	V	L	P	H	T	T	P	W	H	A	M	R	F	L	T	P
Query Conservation																							.	.	.																															.						.
Alig confidence																							.	.	.														.																	.						.
Template Conservation																																							.
Template Sequence		K	I	L	I	V	G	G	G	T	A	G	W	M	A	A	S	Y	L	G	K	A	L	Q	G	T	A	D	I	T	L	L	Q	A	P	D	I	P	.	T	L	G	V	G	E	A	T	I	P	N	L	Q	T	A	F	F	D	F	L	G	I	P	E	D	E	W	M	R	E	C	N	A	S	Y	K	V	A	I	K	F	I
Template Known Secondary structure									S														T	T	T	S													.										T						T					T										T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		92	.	.	.	.	.	.	.																																																																100	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	R	C	F	A	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	M	T	D	E	F	G	W
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	W	R	T	A	G	E	G	T	S	E	A	R	E	L	D	G	G	P	D	H	F	Y	H	S	F	G	L	L	K	Y	H	E	Q	I	P	L	S	H	Y	W	F	D	R	S	Y	R	G	K	T	V	E	P	F	D	Y	A	C	Y	K	E	P	V	I	L	D	A	N	R	S	P	R	R	L	D	G	S	K	V	T
Template Known Secondary structure		S	S	S	S		S				S	S					T	T			S						S	S						T	T													T	T	S											S						T	T	T	B		S	B		T	T			B		S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		P	R	R	N	A	F	I	Q	P	Q	V	D	A	V	M	L	E	G	V	S	R	F	P	N	V	R	C	L	F	S	R	E	L	E	A	F	S	Q	Q	D	D	E	V	T	L	H	L	K	T	A	E	G	Q	R	E	I	V	K	A	Q	W	L	V	A	C	D	G	G	A	S	F	V	.	R	R	T	L	N	V	P
Query Conservation																																																																										.
Alig confidence																											.																											.	.																			.
Template Conservation																											.																											.	.
Template Sequence		N	Y	A	W	H	F	D	A	H	L	V	A	D	F	L	R	R	F	A	T	E	K	L	G	V	.	R	H	V	E	D	R	V	E	H	V	Q	R	D	A	N	G	N	I	E	S	V	R	T	A	T	G	.	.	R	V	F	D	A	D	L	F	V	D	C	S	G	F	R	G	L	L	I	N	K	A	M	E	E	P
Template Known Secondary structure																								S			.														T	T	S								T	T	S	.	.						S							G	G	G								S
Template Predicted Secondary structure																											.																											.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		188	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure										.	.	.											.	.	.
Query SS confidence										.	.	.											.	.	.
Query Sequence		F	E	G	K	T	A	P	N	.	.	.	Q	W	I	V	V	D	I	A	N	D	.	.	.	P	L	S	T	P	H	I	Y	L	C	C	D	P	V	R	P	Y	V	S	A	A	L	P	H	A	V	R	R	F	E	F	M	V	M	P	G	E	T	E	E	Q	L	R	E	P	Q	N	M	R	K	L	L	S	K	V	L
Query Conservation										.	.	.											.	.	.
Alig confidence										.	.	.											.	.	.																																		.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		F	L	D	M	S	D	H	L	L	N	D	S	A	V	A	T	Q	V	P	H	D	D	D	A	N	G	V	E	P	F	T	S	A	I	A	M	K	S	G	W	T	W	K	I	P	M	L	G	R	F	G	T	G	Y	V	Y	S	.	.	.	.	.	S	R	F	A	T	E	D	E	A	V	R	E	F	C	E	M	W	H
Template Known Secondary structure						T	T	T																						S	S							S	S									S	S										.	.	.	.	.	T	T	T	S													T	T
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	P	D	N	V	E	L	I	R	Q	R	V	Y	T	H	N	A	R	L	A	Q	R	F	R	I	D	R	V	L	L	A	G	D	A	A	H	I	M	P	V	W	Q	G	Q	G	Y	N	S	G	M	R	D	A	F	N	L	A	W	K	L	A	L	V	I	Q	G	K	A	R	D	A	L	L	D	T	Y	Q	Q	E
Query Conservation
Alig confidence										.	.	.																																																.	.	.
Template Conservation										.	.	.																																																.	.	.
Template Sequence		L	D	P	E	T	Q	P	L	.	.	.	N	R	I	R	F	R	V	G	R	N	R	R	A	W	V	G	N	C	V	S	I	G	T	S	S	C	F	V	E	P	L	E	S	T	G	I	Y	F	V	Y	A	A	L	Y	Q	L	V	.	.	.	K	H	F	P	D	K	S	L	N	P	V	L	T	A	R	F	N	R	E
Template Known Secondary structure				T	T	T	S			.	.	.											S		S			T	T					S	T	T	T					S	T	T	S															.	.	.		T				T	T
Template Predicted Secondary structure										.	.	.																																																.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	R	D	H	A	K	A	M	I	D	L	S	V	T	A	G	N	V	L	A	P	P	K	.	R	W	Q	G	T	L	R	D
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		I	E	T	M	F	D	D	T	R	D	F	I	Q	A	H	F	Y	F	S	P	R	T	D	T	P	F	W	R	A	N	K	E
Template Known Secondary structure																			T					S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions