Return to main results Retrieve Phyre Job Id

Job DescriptionP77397
Confidence100.00%DateThu Jan 5 12:28:35 GMT 2012
Rank4Aligned Residues515
% Identity23%Templatec2dkhA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas2 testosteroni, in complex with the substrate
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30....... ..40.........50.........60.........70.........80....
Predicted Secondary structure 















.





















Query SS confidence 































.














































Query Sequence  PDIQPAVNHSVQVAIAGAGPVGLMMANYLGQM. GIDVLVVEKLDKLIDYPRAIGIDDEALRTMQSVGLVDDVLPHTTPWH
Query Conservation 
   

     











 

  


 .

 
 



        

  
 
  

 
  


   
   
    
Alig confidence 































.














































Template Conservation             











 

  


  

 
 



        

  
   




  


   
        
Template Sequence  PAHTEAVPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWIN
Template Known Secondary structure 



SS

S

STT
TTS

SSSS

SS
S


TT
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   85....90..... ....100.........110.........120.........130. ........140.........150.......
Predicted Secondary structure 




......












.



Query SS confidence 










. . . . . .



































.

























Query Sequence  AMRFLTPKGRC. . . . . . FADIQPMTDEFGWPRRNAFIQPQVDAVMLEGVSRFP. NVRCLFSRELEAFSQQDDEVTLHLKT
Query Conservation          
  ......                  
 
  

  
        .   
               
      
Alig confidence 










......



































.

























Template Conservation                                     
 
  
   
          
    
  
                
Template Sequence  DVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTV
Template Known Secondary structure 
TTSTT
SS
TTS
SS


STT



B
S
TT
SS

Template Predicted Secondary structure 

































Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   158.160.........170.........180.........190.........200.. .......210.........220.......
Predicted Secondary structure  ........


























..












Query SS confidence  . . . . . . . .












































. .
























Query Sequence  . . . . . . . . AEGQREIVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDI. . ANDPLSTPHIYLCCDPVRPYVSAAL
Query Conservation  ........       
 
  





  
 

  


                ..                         
Alig confidence  ........












































..
























Template Conservation                 
 

 





  
 

  

                                          
 
Template Sequence  TLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPR
Template Known Secondary structure 
SGGGTT



TT
TT



S
S



TTTTSTT
Template Predicted Secondary structure 








































Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   228.230.........240.........250.........260........ .270.........280.........290.......
Predicted Secondary structure 
















..........





















Query SS confidence 








































. . . . . . . . . .




























Query Sequence  PHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVE. . . . . . . . . . LIRQRVYTHNARLAQRFRIDRVLLAGDAA
Query Conservation                                           ..........             
     


 





Alig confidence 



















..


















..........




























Template Conservation                      ..                                                


 





Template Sequence  EGGHLVRFYVEMDNITVEQL. . IATAQRVLHPYKLEVKNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDAC
Template Known Secondary structure  TTSS





..TTS





S
SBS


SS

TTS




GGGT
Template Predicted Secondary structure 








..


































Template SS confidence 















































































   263......270.........280.. .......290.........300.........310.........320.........330.........340
 
   298.300.........310.........320.........330.........340.........350.........360.........370.......
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  HIMPVWQGQGYNSGMRDAFNLAWKLALVIQGKARDALLDTYQQERRDHAKAMIDLSVTAGNVLAPPKRWQGTLRDGVSWL
Query Conservation 
   
  


 
 

 

  





 
  
     

  
  



 
      
                 
      
Alig confidence 
































































...............
Template Conservation 
   
  


 
 

 

 






 
  
 
   

 


 



 
   
  
         ...............
Template Sequence  HTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQVVAQQLIDFDREWAKDPKE. . . . . . . . . . . . . . .
Template Known Secondary structure 

GGG

TTTTSB
GGGGS


...............
Template Predicted Secondary structure 













...............
Template SS confidence 















































































   352.......360.........370.........380.........390.........400.........410......
 
   378.380.........390.........400.........410 .........420.... .....430......... 440.........450
Predicted Secondary structure 




















....











.






..





Query SS confidence 
































. . . .













.














. .










Query Sequence  LNYLPPVKRYFLEMRFKPMPQYYGGALMREGEA. . . . KHSPVGKMFIQPKV. TLENGDVTLLDNAIG. . ANFAVIGWGCN
Query Conservation                       
           ....     
   
    .         
     ..    

     
Alig confidence  ...





























....













.














..










Template Conservation  ...                                       
 
                                   
Template Sequence  . . . FQKYFEQHGRFTAGVGTHYAPSLLTGQAKHQALASGFTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFAAQ
Template Known Secondary structure  ...TT





SSSSS


TTGGGBTTS
TTSB



TTT

GGGG

SSS


T
Template Predicted Secondary structure  ...





















































Template SS confidence 















































































   431........440.........450.........460.........470.........480.........490.........500.......
 
   451..... ...460.........470.........480.........490.
Predicted Secondary structure 


.......................................




















Query SS confidence 





. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .


































Query Sequence  PLWGMS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEQIQQWRALGTRFIQVVPEVQIHTAQDNHDGVLR
Query Conservation        .......................................                
                  
Alig confidence 





.......................................


































Template Conservation                                                                                  
Template Sequence  NDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSIFDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPD
Template Known Secondary structure  TTTT
TTS
TT
S
TTS
TTSS
SS
GGG

GGGS
GGGS
TTTT


S

Template Predicted Secondary structure 






















































Template SS confidence 















































































   508.510.........520.........530.........540.........550.........560.........570.........580.......
 
   492.......500....... ..510.........520.........530.........540
Predicted Secondary structure 







..









Query SS confidence 















. .
































Query Sequence  VGDTQGRLRSWFAQHN. . ASLVVMRPDRFVAATAIPQTLGKTLNKLASVMT
Query Conservation    
             ..   






 

              
     
Alig confidence 















..
































Template Conservation              
     
  





  

          
   
   
 
Template Sequence  LKNAGQDIFELRGIDRQQGALVVVRPDQYVAQVLPLGDHAALSAYFESFMR
Template Known Secondary structure 
SSTT

TTB
TTT

TTSB
TT
TTB
Template Predicted Secondary structure 





















Template SS confidence 


















































   588.590.........600.........610.........620.........630........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions