Job Description P77397 Confidence 95.54% Date Thu Jan 5 12:28:35 GMT 2012 Rank 371 Aligned Residues 137 % Identity 13% Template c1zofB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori Resolution 2.95 Å

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		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.						430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.								.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																			.	.	.	.	.	.	.																																.	.	.
Query SS confidence																		.	.	.	.	.																			.	.	.	.	.	.	.																																.	.	.
Query Sequence		P	V	G	K	M	F	I	Q	P	K	V	T	L	E	N	G	.	.	.	.	.	D	V	T	L	L	D	N	A	I	G	A	N	F	A	V	I	G	W	.	.	.	.	.	.	.	G	C	N	P	L	W	G	M	S	D	E	Q	I	Q	Q	W	R	A	L	G	T	R	F	I	Q	V	V	P	E	V	Q	.	.	.
Query Conservation																		.	.	.	.	.																			.	.	.	.	.	.	.																																.	.	.
Alig confidence																		.	.	.	.	.																			.	.	.	.	.	.	.																																.	.	.
Template Conservation
Template Sequence		V	V	T	K	L	A	P	D	F	K	A	P	A	V	L	G	N	N	E	V	D	E	H	F	E	L	S	K	N	L	G	K	N	G	V	I	L	F	F	W	P	K	D	F	T	F	V	C	P	T	E	I	I	A	F	D	K	R	V	K	D	F	H	E	K	G	F	N	V	I	G	V	S	I	D	S	E	Q	V	H
Template Known Secondary structure			T	T	S	B											T	T	S								G	G	G	G			S	S								S		S	S		S	S																		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
									479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.							.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.						.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure		.	.	.	.	.	.	.																													.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	H	T	A	Q	D	N	H	D	G	V	L	R	V	G	D	T	Q	G	R	L	R	S	W	F	A	Q	H	.	.	.	.	.	.	N	A	S	L	V	V	M	R	P	D	R	F	V	A	A	T	A	.	.	.	.	.	I	P	Q	T	L	G	K	T	L	N	K	L	A	S	V	M	T
Query Conservation		.	.	.	.	.	.	.																													.	.	.	.	.	.																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		F	A	W	K	N	T	P	V	E	K	G	G	I	G	Q	V	S	F	P	M	V	A	D	I	T	K	S	I	S	R	D	Y	D	V	L	F	E	E	A	I	A	L	R	G	A	F	L	I	D	K	N	M	K	V	R	H	A	V	I	N	D	L	P	L	G	R	N	A	D	E	M	L	R	M	V	D	A	L	L	H
Template Known Secondary structure							S		G	G	G	T						S	S						T	T	S						T	T				T	T	T											T	T	S	B									S	S			T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		541	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	P	D	A	D	V	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	E	H	G	E	V	C	P	A
Template Known Secondary structure				S	S						T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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