Return to main results Retrieve Phyre Job Id

Job DescriptionP77397
Confidence98.54%DateThu Jan 5 12:28:35 GMT 2012
Rank187Aligned Residues45
% Identity29%Templatec1djnB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50
Predicted Secondary structure 






















Query SS confidence 












































Query Sequence  PDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVVEKLDKL
Query Conservation 
   

     











 

  


 

 
 



    
Alig confidence 












































Template Conservation       

   















  

  
  





   
Template Sequence  PEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI
Template Known Secondary structure  TTB



SS



STT

SSSST
Template Predicted Secondary structure 





















Template SS confidence 












































   380.........390.........400.........410.........420....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions