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Job DescriptionP65807
Confidence99.43%DateThu Jan 5 12:10:18 GMT 2012
Rank58Aligned Residues224
% Identity18%Templatec3pb6X_
PDB info PDB header:transferaseChain: X: PDB Molecule:glutaminyl-peptide cyclotransferase-like protein; PDBTitle: crystal structure of the catalytic domain of human golgi-resident2 glutaminyl cyclase at ph 6.5
Resolution1.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.. .......60. ........70.. .......80.........90........
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Query Sequence  PSESCDEKRVVHRIKEEMEKV. . GFDKVEIDP. . . . . . . . . . MGNVLGYIGHG. PRLVAMDAHIDTVGIGNIKNWDFDPY
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Template Sequence  TPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHYDSKLFPPGST. . . . . .
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   106...110.........120.........130.........140.........150.........160.........170.........
 
   99100.........110.........120......... 130.........140.........150 .........160.
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Query Sequence  EGMETDELIGGRGTSDQEGGMASMVYAGKII. . . . . KDLGLEDEYTLLVTGTVQEED. . . . . . . . CDGLCWQYIIE. . . .
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Template Sequence  . . . . . . . . . PFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESI
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TTTTTTT
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   180.........190.........200.........210.........220.........230.........240.........250
 
   162.......170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  . . . . . . QSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLG
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Template Sequence  PHSPGPTRIQAIELFMLLDLLGAPNP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
SS
SBTTTTS
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   251........260.........270......
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  KGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPT
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B
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   277..
 
   316...320.........330..... ....340.........350.........360......... 370....... ..
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Query Sequence  WKVEEDHFTVKALVNAYEGL. . . . . . . . . . . . FGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGK. EPEAHAPN. . . EK
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Template Sequence  SHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLRRGVPVLHLISTPFPAVWHTPADTEVN
Template Known Secondary structure 


GGGTT

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   280.........290.........300.........310.........320.........330.........340.........350.........
 
   380.........390.........400.
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Query Sequence  TWKSHLVTCAAMYAAIPLSWLA
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Template Sequence  LHPPTVHNLCRILAVFLAEYLG
Template Known Secondary structure  S
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   360.........370.........380.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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