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Job DescriptionP65807
Confidence100.00%DateThu Jan 5 12:10:18 GMT 2012
Rank13Aligned Residues361
% Identity22%Templatec3mruB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70 .........80.........90
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Query Sequence  ADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIG. . . . . HGPRLVAMDAHIDTVGIGNI. . .
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Template Sequence  APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRR. DPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD
Template Known Secondary structure  TTS

BTT

TTTT

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TTS



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B
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   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  KNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFV
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Template Sequence  HDFTQDPIQPYIDGEWVTAKGTTLG. ADNGIGMASCLAVLASKEIKHGPIEVLLTIDEEAGMTGAFGLEAGWLKGDILLN
Template Known Secondary structure 

TTTS


TTSSB


.T
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S
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SSSTTS

TTS


S
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   93......100.........110....... ..120.........130.........140.........150.........160.........170.
 
   171... .....180.........190...... ...200........ .210.........220...
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Query Sequence  VSTE. . . . . . . . . . . . . . . . . PTDCQVYRGQRGRMEIRIDVQG. VSCHGSAPERGD. . NAIFKMGPILGELQE. . . . . . .
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Template Sequence  TDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQELDLRLV
Template Known Secondary structure 




TT





TT




BTTTGGGS



T
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   224...
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Template Sequence  EFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNAC
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GGGTTT






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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
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Query Sequence  LGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVY
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Template Sequence  PNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELA. . . . . . . . . . . . . . . . . GAQI
Template Known Secondary structure 

S


SSSTT
TTSST.................T
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   332.......340.........350.........360.........370.........380.........390 ....
 
   308.310.........320.........330.........340.........350........ .360.........370.........380......
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Query Sequence  PTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRH. GIPVIGFGPGKEPEAHAPNEKTWKSHLV
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Template Sequence  EFSGAYPGWKPDADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMVSFGP. TIKFPHSPDEKVKIDTVQ
Template Known Secondary structure 

B


SS
TTTTTT

S

SS

GGGGGGSSSS




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STTSTT
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   395....400.........410.........420.........430.........440.........450..... ....460.........470...
 
   387..390.........
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Query Sequence  TCAAMYAAIPLSW
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Template Sequence  LFWDQMVALLEAI
Template Known Secondary structure  T
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   474.....480......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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