Job Description P65807 Confidence 100.00% Date Thu Jan 5 12:10:18 GMT 2012 Rank 8 Aligned Residues 357 % Identity 20% Template c3ic1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase2 from haemophilus influenzae Resolution 2.30 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		Q	A	D	M	T	R	F	L	R	D	M	V	A	I	P	S	E	S	C	D	E	K	R	V	V	H	R	I	K	E	E	M	E	K	V	G	F	D	K	V	E	I	D	P	M	G	.	.	.	N	V	L	G	Y	I	G	H	G	P	R	L	V	A	M	D	A	H	I	D	T	V	G	I	G	N	I	K	N	W	D
Query Conservation																																																.	.	.
Alig confidence																																											.					.	.	.
Template Conservation																																											.
Template Sequence		K	E	K	V	V	S	L	A	Q	D	L	I	R	R	P	S	I	S	P	N	D	E	G	C	Q	Q	I	I	A	E	R	L	E	K	L	G	F	Q	I	E	W	.	M	P	F	N	D	T	L	N	L	W	A	K	H	G	T	S	E	P	V	I	A	F	A	G	H	T	D	V	V	P	T	G	D	E	N	Q	W	S
Template Known Secondary structure														T	S			B	T	T			T	T											T	T	T						.			B	T	T	B								S	S	S	S	S										B						G	G	G		S
Template Predicted Secondary structure																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		F	D	P	Y	E	G	M	E	T	D	E	L	I	G	G	R	G	T	S	D	Q	E	G	G	M	A	S	M	V	Y	A	G	K	I	I	K	D	L	G	L	E	D	E	Y	T	L	L	V	T	G	T	V	Q	E	E	D	C	D	G	L	C	W	Q	Y	I	I	E	Q	.	.	.	S	G	I	R	P	E	F	V	V
Query Conservation																																																																						.	.	.
Alig confidence																																																																						.	.	.
Template Conservation
Template Sequence		S	P	P	F	S	A	E	I	I	D	G	M	L	Y	G	R	G	A	A	D	M	K	G	S	L	A	A	M	I	V	A	A	E	E	Y	V	K	A	N	P	N	H	K	G	T	I	A	L	L	I	T	S	D	E	E	A	T	A	K	D	G	T	I	H	V	V	E	T	L	M	A	R	D	E	K	I	T	Y	C	M
Template Known Secondary structure		S		T	T	T					T	T				S	T	T	T	T	T	T																			T	T		S	S								S		S	S	S			S	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		172	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		S	T	E	P	T	D	C	Q	.	.	.	.	.	V	Y	R	G	Q	R	G	R	M	E	I	R	I	D	V	Q	G	V	S	C	H	G	S	A	P	E	R	G	D	N	A	I	F	K	M	G	P	I	L	G	E	L	Q	E	L	S	Q	R	L	G	Y	D	E	F	L	G	K	G	T	L	T	V	S	E	I	F	F
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																						.	.	.	.																															.	.	.
Template Conservation																																				.	.	.	.																															.	.	.
Template Sequence		V	G	E	P	S	S	A	K	N	L	G	D	V	V	K	N	G	R	R	G	S	I	T	G	N	L	Y	I	Q	G	I	Q	Y	P	.	.	.	.	H	L	A	E	N	P	I	H	K	A	A	L	F	L	Q	E	L	T	T	Y	Q	W	D	K	G	N	E	F	F	P	.	.	.	P	T	S	L	Q	I	A	N	I
Template Known Secondary structure							B	S	S	S	T	T	S																							.	.	.	.			T	T																						B	T	T	B		.	.	.
Template Predicted Secondary structure																																				.	.	.	.																															.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	P	S	R	C	A	V	A	D	S	C	A	V	S	I	D	R	R	L	T	W	G	E	T	W	E	G	A	L	D	E	I	R	A	L	P	A	V	Q	K	A	N	A	V	V	S	M	Y	N	Y	D	R	P	S	W	T	G	L	V	Y	P	T	E	C	Y	F	P	T	W	K	V	E	E	D	H	F	T	V	K
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	G	T	G	S	V	I	P	A	E	L	Y	I	Q	F	N	L	R	Y	C	T	E	V	T	D	E	I	I	K	Q	K	V	A	E	M	L	E	K	H	N	L	K	Y	R	I	E	W	N	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	F	L	T	K	P	G	K	L	L	D
Template Known Secondary structure											S												T	T	S																T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																	290	.	.	.	.	.	.	.	.	.	300	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	N	A	Y	E	G	L	F	G	K	A	P	V	V	D	K	W	T	F	S	T	N	G	V	S	I	M	G	R	H	G	I	P	V	I	G	F	G	P	G	K	E	P	E	A	H	A	P	N	E	K	T	W	K	S	H	L	V	T	C	A	A	M	Y	A	A	I	P	L	S	W	L
Query Conservation
Alig confidence																										.																	.
Template Conservation																										.																	.
Template Sequence		S	I	T	S	A	I	E	E	T	I	G	I	T	P	K	A	E	T	G	G	G	T	S	D	.	G	R	F	I	A	L	M	G	A	E	V	V	E	F	G	P	.	L	N	S	T	I	H	K	V	N	E	C	V	S	V	E	D	L	G	K	C	G	E	I	Y	H	K	M	L	V	N	L	L
Template Known Secondary structure												S										S			S	.					G	G	G	T								S	.	B		T	T	T	T	S	T	T
Template Predicted Secondary structure																										.																	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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