Job Description P65807 Confidence 100.00% Date Thu Jan 5 12:10:18 GMT 2012 Rank 10 Aligned Residues 354 % Identity 19% Template c3gb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution Resolution 2.04 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.										.	.	.
Query SS confidence																																														.	.	.	.	.	.	.										.	.	.
Query Sequence		Y	Q	A	D	M	T	R	F	L	R	D	M	V	A	I	P	S	E	S	C	D	E	K	R	V	V	H	R	I	K	E	E	M	E	K	V	G	F	D	K	V	E	I	D	.	.	.	.	.	.	.	P	M	G	N	V	L	G	Y	I	.	.	.	G	H	G	P	R	L	V	A	M	D	A	H	I	D	T	V	G
Query Conservation																																														.	.	.	.	.	.	.										.	.	.
Alig confidence																																														.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		N	Q	E	R	L	V	N	E	F	X	E	L	V	Q	V	D	S	E	T	K	F	E	A	E	I	C	K	V	L	T	K	K	F	T	D	L	G	V	E	V	F	E	D	D	T	X	A	V	T	G	H	G	A	G	N	L	I	C	T	L	P	A	T	K	D	G	V	D	T	I	Y	F	T	S	H	X	D	T	V	V
Template Known Secondary structure															T	S			B	T	T																T	T							S								S	S										S	S	T	T												B		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		I	G	N	I	K	N	W	D	F	D	P	Y	E	G	M	E	T	D	E	L	I	G	G	R	G	T	.	.	.	.	S	D	Q	E	G	G	M	A	S	M	V	Y	A	G	K	I	I	K	D	L	G	L	E	D	E	Y	T	L	L	V	T	G	T	V	Q	E	E	D	C	D	G	L	C	W	Q	Y	I	I	E	Q
Query Conservation																												.	.	.	.
Alig confidence				.	.	.	.	.	.	.																		.	.	.	.																							.
Template Conservation				.	.	.	.	.	.	.																																												.
Template Sequence		P	G	.	.	.	.	.	.	.	N	G	I	K	P	S	I	K	D	G	Y	I	V	S	D	G	T	T	I	L	G	A	D	D	K	A	G	L	A	S	X	F	E	A	I	R	V	L	K	E	K	N	I	.	P	H	G	T	I	E	F	I	I	T	V	G	E	E	S	G	L	V	G	A	K	A	L	D	R	E	R
Template Known Secondary structure		S		.	.	.	.	.	.	.	S	S							T	T						S	S	S																							T	T		.											S		G	G	G	T	S						S		G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.																																												.
Template SS confidence
		83	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		S	G	I	R	P	E	F	V	V	S	T	E	P	T	D	C	Q	V	Y	R	G	Q	R	G	R	M	E	I	R	I	D	V	Q	G	V	S	C	H	G	S	A	.	P	E	R	G	D	N	A	I	F	K	M	G	P	I	L	G	E	L	Q	E	L	S	Q	R	L	G	Y	D	E	F	L	G	K	G	T	L	T	V
Query Conservation																																											.
Alig confidence																																											.																			.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		I	T	A	K	Y	G	Y	A	L	D	S	D	G	K	V	G	E	I	V	V	A	A	P	T	Q	A	K	V	N	A	I	I	R	G	K	T	A	H	A	G	V	A	P	E	K	G	V	S	A	I	T	I	A	A	K	A	I	A	K	X	.	.	.	.	.	.	.	P	L	G	R	I	D	S	E	T	T	A	N	I
Template Known Secondary structure					S									S		T	T																			B			B	T	T	T		G	G	G	S	B											T	T	S	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	I	F	F	T	S	P	S	R	C	A	V	A	D	S	C	A	V	S	I	D	R	R	L	T	W	G	E	T	W	E	G	A	L	D	E	I	R	A	L	P	A	V	Q	K	A	N	A	V	V	S	M	Y	N	Y	D	R	P	S	W	T	G	L	V	Y	P	T	E	C	Y	F	P	T	W	K	V	E	E	D
Query Conservation
Alig confidence						.																																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	F	E	.	G	G	T	Q	T	N	I	V	C	D	H	V	Q	I	F	A	E	A	R	S	L	I	N	E	K	X	E	A	Q	V	A	K	X	K	E	A	F	E	T	T	A	K	E	X	G	G	.	.	.	.	.	.	.	.	.	.	.	H	A	D	V	E	V	N	V	X	Y	P	G	F	K	F	A	D	G
Template Known Secondary structure						.			S		T	T	B														S	S																						T	T		.	.	.	.	.	.	.	.	.	.	.																	T	T
Template Predicted Secondary structure						.																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.												.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	T	V	K	A	L	V	N	A	Y	E	G	L	F	G	K	A	P	V	V	D	K	W	T	F	S	T	N	G	V	S	I	M	G	R	H	G	I	P	V	I	G	F	G	P	G	K	E	P	E	A	H	A	P	N	E	K	T	W	K	S	H	L	V	T	C	A	A	M	Y	A	A	I	P	L	S	W	L
Query Conservation
Alig confidence																.															.																		.
Template Conservation																.															.																		.
Template Sequence		D	H	V	V	E	V	A	K	R	A	A	E	K	I	.	G	R	T	P	S	L	H	Q	S	G	G	G	S	D	.	A	N	V	I	A	G	H	G	I	P	T	V	N	L	A	V	G	.	Y	E	E	I	H	T	T	N	E	K	I	P	V	E	E	L	A	K	T	A	E	L	V	V	A	I	I	E	E	V	A
Template Known Secondary structure															T	.	T									S	S				.							T	T										.		B	S	T	T	S	T	T
Template Predicted Secondary structure																.															.																		.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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