Job Description P65807 Confidence 100.00% Date Thu Jan 5 12:10:18 GMT 2012 Rank 21 Aligned Residues 362 % Identity 17% Template c1vixA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of a putative peptidase t Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Query Sequence		Q	A	D	M	T	R	F	L	R	D	M	V	A	I	P	S	E	S	C	.	.	.	.	.	.	.	.	.	.	D	E	K	R	V	V	H	R	I	K	E	E	M	E	K	V	G	F	D	K	V	E	I	D	P	M	G	N	V	L	G	Y	I	.	.	.	.	G	H	G	P	R	L	V	A	M	D	A	H	I	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		L	D	K	L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G	F	I	S	H	V	D
Template Known Secondary structure															S			B			S	S		S	S	S	S	S	S	T															T	T	T								T	T	S									S	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.																										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		T	V	G	I	G	N	I	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	F	D	P	Y	E	G	M	E	T	D	E	L	I	G	G	R	G	T	S	.	.	.	.	D	Q	E	G	G	M	A	S	M	V	Y	A	G	K	I	I	K	D	L	G	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.																					.
Template Conservation																																																																																	.
Template Sequence		T	S	P	D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q	Q	K	K	.
Template Known Secondary structure		B		T	T	S			S	S								S			S	S					T	T	T	T					T	T	T		G	G	G	G	G		T	T	S							S	S	S																							T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	Y	T	L	L	V	T	G	T	V	Q	E	E	D	C	D	G	L	C	W	Q	Y	I	I	E	Q	S	G	I	R	P	E	F	V	V	S	T	E	P	T	D	C	Q	V	Y	R	G	Q	R	G	R	M	E	I	R	I	D	V	Q	G	V	S	C	H	G	S	A	P	E	R	G	D	N	A	I	F	K	M
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		I	P	H	G	D	I	R	V	A	F	T	P	D	E	E	V	G	K	.	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	G	V	M	V	N	A	L	S	L	A
Template Known Secondary structure													S		G	G	G	T		.	T	T	T	T									S									S	T	T						B													B				G	G	G		T	T	T		B
Template Predicted Secondary structure																				.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	I	L	G	E	L	Q	E	L	S	Q	R	L	G	Y	D	E	F	L	G	K	G	T	L	T	V	S	E	I	F	F	T	S	P	S	R	C	A	V	A	D	S	C	A	V	S	I	D	R	R	L	T	W	G	E	T	W	E	G	A	L	D	E	I	R	A	L	P	A	V	Q	K	A	N	A	V	V	S	M
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		A	R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	.	.	.	.	.	.	.	.	.	F	Y	H	L	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	P	D	C
Template Known Secondary structure								S		T	T	S	S	T	T	T			T	T			.	.	.	.	.	.	.	.	.											S	S											S	S																				T	T			T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	Y	D	R	P	S	W	T	G	L	V	Y	P	T	E	C	Y	F	P	T	W	K	V	E	E	D	H	F	T	V	K	A	L	V	N	A	Y	E	G	L	F	G	K	A	P	V	V	D	K	W	T	F	S	T	N	G	V	S	I	M	G	R	H	G	I	P	V	I	G	F	G	P	G	K	E	P	E	A	H
Query Conservation
Alig confidence				.	.	.	.	.	.	.																																	.																.																	.
Template Conservation				.	.	.	.	.	.	.																																	.																.																	.
Template Sequence		Y	I	.	.	.	.	.	.	.	E	L	V	I	E	D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	.	D	I	E	P	E	L	K	P	I	R	G	G	T	D	G	.	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	.	G	Y	N	Y	H
Template Known Secondary structure				.	.	.	.	.	.	.											S						T	S	T													T	.	T								B	S	S					.				T	T	T	T									S	.			S		S
Template Predicted Secondary structure				.	.	.	.	.	.	.																																	.																.																	.
Template SS confidence
		310	.								.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	N	E	K	T	W	K	S	H	L	V	T	C	A	A	M	Y	A	A	I	P	L	S	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	H	E	F	V	T	L	E	G	M	E	K	A	V	Q	V	I	V	R	I	A	E	L	T	A
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions