Job Description P16691 Confidence 99.75% Date Thu Jan 5 11:35:42 GMT 2012 Rank 50 Aligned Residues 135 % Identity 27% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.																			.
Query SS confidence																												.	.	.																			.
Query Sequence		M	P	A	C	E	L	R	P	A	T	Q	Y	D	T	D	A	V	Y	A	L	I	C	E	L	K	Q	.	.	.	A	E	F	D	H	H	A	F	R	V	G	F	N	A	N	L	R	D	.	P	N	M	R	Y	H	L	A	L	L	D	G	E	V	V	G	M	I	G	L	H	L	Q	F	H	L	H	H	V	N	W	I
Query Conservation																												.	.	.																			.
Alig confidence				.																								.	.	.																			.
Template Conservation				.
Template Sequence		L	S	.	P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L	R
Template Known Secondary structure		S	G	.	G	G						G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		G	E	I	Q	E	L	V	V	M	P	Q	A	R	G	L	N	V	G	S	K	L	L	A	W	A	E	E	E	A	R	Q	A	G	A	E	M	T	E	L	S	T	N	V	K	R	H	D	A	H	R	F	Y	L	R	E	G	Y	E	Q	S	H	.	F	R	F	T	K	A	L
Query Conservation																																																															.
Alig confidence																																											.	.	.	.	.	.	.	.													.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		G	F	V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R	X	L	L	G	Q	A	L
Template Known Secondary structure											G	G	G	T	T	S	S																T	T									.	.	.	.	.	.	.	.						T	T													S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions