Return to main results Retrieve Phyre Job Id

Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank17Aligned Residues250
% Identity18%Templated2pd4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.. .......20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 





..




















Query SS confidence 










. .


































































Query Sequence  AQVAIITASDS. . GIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLG
Query Conservation 









 ..


 


  
   

 


  
                                             
Alig confidence 










..






















..









































Template Conservation 

 







  


 
 
  

  

 
 
  
 ..                      
                   
Template Sequence  GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN. . ESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG
Template Known Secondary structure  T



STTSTTT
SS..TTTTT




TT
TS
Template Predicted Secondary structure 













..

















Template SS confidence 















































































   6...10.........20.........30.........40. ........50.........60.........70.........80...
 
   80.........90.........100.........110.........120......... 130.........140.........150........
Predicted Secondary structure 



































.




















Query SS confidence 

















































.




























Query Sequence  RIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQ. GQGGRIINITSVHEHTPLPDASAYTAAKH
Query Conservation                                                    .     
   

            
 


 
Alig confidence 

















































.




























Template Conservation       
  

                                               
  

            
 


 
Template Sequence  SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA
Template Known Secondary structure 






GGGGSS
GGG

TGGG
GGGTS

TT
Template Predicted Secondary structure 















































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   159160.........170.........180.........190..... ....200.........210.........220.........230......
Predicted Secondary structure 




















..















Query SS confidence 




































. .








































Query Sequence  ALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDD. . SDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQS
Query Conservation 
        
 
     



 
 

 
 
       ..           
  
   




  
 

 
     


  
Alig confidence 




































..








































Template Conservation 
        
       
 

 
 

 
 
                    

 
   




  
 

 
  
  


  
Template Sequence  ALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV
Template Known Secondary structure  TTT





TTGGGSTTSTTSS


SGGGTT

S
Template Predicted Secondary structure 



































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   237..240.........250...
Predicted Secondary structure 










Query SS confidence 
















Query Sequence  LIVDGGFMLANPQFNPE
Query Conservation 
 



  
        
Alig confidence 
















Template Conservation 
 



           
Template Sequence  HFVDAGYHVMGMGAVEE
Template Known Secondary structure  STTGGG
SS


TT
Template Predicted Secondary structure 










Template SS confidence 
















   244.....250.........260
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions