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Job DescriptionP33368
Confidence98.75%DateThu Jan 5 11:52:08 GMT 2012
Rank238Aligned Residues209
% Identity13%Templated1rkxa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV. . PSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH
Template Known Secondary structure  T
TTTSTT
SS
SSS..S
TTTTTTS

TT


S
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   910.........20.........30.........40...... ...50.........60.........70.........80......
 
   82.......90.........100.........110.........120.........130.........140.... .....
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEH. . . . . . . . . . . . TPLPD
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Template Sequence  MAAQPLVRLSYSEPVETYSTN. . . . . . . . . . . . . VMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG
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GGGB



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B
TTS
B

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   87..90.........100....... ..110.........120.........130.........140.........150...
 
   150.........160.........170. ........180.........190.........200.... .....210..
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Query Sequence  ASAYTAAKHALGGLTKAMALEL. . . . . . VRHKILVNAVAPGAIATPMNGMDDSDVKPDAEP. . . . . . . . . . . SIPLRRFG
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Template Sequence  YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ
Template Known Secondary structure  SSS
GGG





TT


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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   213......220.....
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Query Sequence  ATHEIASLVVWLC
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Template Sequence  HVLEPLSGYLLLA
Template Known Secondary structure  T
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   234.....240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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