Return to main results Retrieve Phyre Job Id

Job DescriptionP33368
Confidence98.78%DateThu Jan 5 11:52:08 GMT 2012
Rank236Aligned Residues223
% Identity13%Templated1db3a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  QVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRID
Query Conservation 








 


 


  
   

 


  
                                                
Alig confidence 
































.................





























Template Conservation 
 










  

  
   
  
    
 .................       

 
             
 


 
Template Sequence  KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRP. . . . . . . . . . . . . . . . . KFHLHYGDLSDTSNLTRILREVQPDEVYNL
Template Known Secondary structure 
TTTSTT



.................




SS


S
Template Predicted Secondary structure 









.................











Template SS confidence 















































































   2.......10.........20.........30.... .....40.........50.........60....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  VLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGG
Query Conservation                                                      
   

            
 


 
   
Alig confidence 















































































Template Conservation 

                                                                              
Template Sequence  GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW
Template Known Secondary structure 



TTTTTTS
TTT
TTT
GGGGTT

SSSB
TTS




S
Template Predicted Secondary structure 





















































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   163......170....... ..180.........190.........200.........210 .........220.........230
Predicted Secondary structure 





...




















.........




Query SS confidence 














. . .
































. . . . . . . . .



















Query Sequence  LTKAMALELVRHKIL. . . VNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRR. . . . . . . . . FGATHEIASLVVWLCSEGAN
Query Conservation       
 
     

...

 
 

 
 
                  
  
.........   




  
 

 
    
Alig confidence 














...
































.........
















...
Template Conservation                        
                                        
 
 
         ...
Template Sequence  ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ. . .
Template Known Secondary structure 





TTS
TTSTTS


S
TT


TTSS...
Template Predicted Secondary structure 































...
Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230.........240..
 
   231........240......
Predicted Secondary structure 








Query SS confidence 















Query Sequence  YTTGQSLIVDGGFMLA
Query Conservation   


  
 



  
 
Alig confidence  .














Template Conservation  .       
      
Template Sequence  . EQPEDFVIATGVQYS
Template Known Secondary structure  .SS







Template Predicted Secondary structure  .







Template SS confidence 















   243......250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions