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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank54Aligned Residues241
% Identity27%Templatec3uf0A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT. . DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD
Template Known Secondary structure  T
TTTSTT
SS..TTTT


TT
S


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   910.........20.........30.........40.. .......50.........60.........70.........80......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  VLVNNAGIIARAPA. . EEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVV
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G..GG

TT


GGGTS

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   87..90.........100 .........110.........120.........130.........140.........150.........160....
 
   162.......170.........180.........190. ........200.........210.........220.........230.........
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMN. . GMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIV
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Template Sequence  GLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAV
Template Known Secondary structure  GGGT
SB
SGGGTSSTTSS
B
GGGGSGGGTT

S
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   240......
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Query Sequence  DGGFMLA
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Template Sequence  DGGWLAS
Template Known Secondary structure  STTGGG
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   245....250.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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