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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank35Aligned Residues241
% Identity30%Templatec3sjuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:keto reductase; PDBTitle: hedamycin polyketide ketoreductase bound to nadph
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRID
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Template Sequence  QTAFVTGVSSGIGLAVARTLAARGIAVYGCAR. DAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG
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   5....10.........20.........30...... ...40.........50.........60.........70.........80...
 
   83......90.........100.........110.........120.........130 .........140.........150.........160.
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Query Sequence  VLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQG. QGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  ILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVV
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   162.......170.........180.........190..... ....200.........210.........220.........230
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMNGMDD. . . . . . . . . . . SDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGAN
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Template Sequence  GFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAA
Template Known Secondary structure  TGGGTSSB
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   231........240....
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Query Sequence  YTTGQSLIVDGGFM
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Template Sequence  SITAQALNVCGGLG
Template Known Secondary structure  G

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   244.....250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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