Return to main results Retrieve Phyre Job Id

Job DescriptionP33368
Confidence99.95%DateThu Jan 5 11:52:08 GMT 2012
Rank189Aligned Residues208
% Identity17%Templatec3l6eA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase, short-chain dehydrogenase/reductase family; PDBTitle: crystal structure of putative short chain dehydrogenase/reductase2 family oxidoreductase from aeromonas hydrophila subsp. hydrophila3 atcc 7966
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  QVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRID
Query Conservation 








 


 


  
   

 


  
                                                
Alig confidence 
































....










































Template Conservation   







 


  

  
   
  

   
 ....                                           
Template Sequence  GHIIVTGAGSGLGRALTIGLVERGHQVSXXGRR. . . . YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPE
Template Known Secondary structure 
STTSTT
S
....GGG

TTS
S
S
Template Predicted Secondary structure 










....


















Template SS confidence 















































































   4.....10.........20.........30...... ...40.........50.........60.........70.........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  VLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGG
Query Conservation                                                      
   

            
 


 
   
Alig confidence 








......

































..




























Template Conservation           ......                                  ..     

            
 


 

  
Template Sequence  LVLHCAGTG. . . . . . VYTAEQIRRVXESNLVSTILVAQQTVRLIGERGG. . VLANVLSSAAQVGKANESLYCASKWGXRG
Template Known Secondary structure 



......


TTT
..



SS
SS
Template Predicted Secondary structure 








......













..
















Template SS confidence 















































































   80........ .90.........100.........110.........120.. .......130.........140.........150.
 
   163......170.........180.........190.........200.........210.........220..... ....230.........240.
Predicted Secondary structure 





























.








Query SS confidence 






























































.















Query Sequence  LTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLC. SEGANYTTGQSLIVDG
Query Conservation       
 
     



 
 

 
 
                  
  
   




  
 

 .
     


  
 


Alig confidence 



























....................














.















Template Conservation      

 
    

 
  
 

 
 
  ....................       
              
    
    
Template Sequence  FLESLRAELKDSPLRLVNLYPSGIRSEF. . . . . . . . . . . . . . . . . . . . FXTPEDAAAYXLDALEARSSCHVTDLFIGRNE
Template Known Secondary structure  TTTSS



....................
B
T


SS






Template Predicted Secondary structure 








....................
















Template SS confidence 















































































   158.160.........170.........180..... ....190.........200.........210.......
 
   242
Predicted Secondary structure 
Query SS confidence 
Query Sequence  G
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  G
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   229
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions