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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank28Aligned Residues244
% Identity27%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL
Template Known Secondary structure  T
TTTSTT
SS
TTTS
S
TTSS

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   44.....50.........60.........70.........80.........90.........100.........110.........120...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  NILVNNVAQQYPQQGLEYITAEQLEKTFRINI. . FSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIV
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SSGGG

T..TT

TT


T

TT
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   124.....130.........140.........150..... ....160.........170.........180.........190.........200.
 
   162.......170.........180.........190... ......200.........210.........220.........230.........240
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMNGM. DDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVD
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Template Sequence  AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQXIHVN
Template Known Secondary structure  GGGT

SB
STTTTTTS
TTTTTTSTTSS
B
GGGTSGGGTT

S
S
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   202.......210.........220.........230.........240.........250.........260.........270.........280.
 
   241......
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Query Sequence  GGFMLAN
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Template Sequence  GGVIVNG
Template Known Secondary structure  SS




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   282......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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