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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank107Aligned Residues224
% Identity25%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GKTSLITGASSGIGSAIARLLHKLGSKVIISGS. NEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK. . . . . . . . . . .
Template Known Secondary structure  T
TTTTSTT
S.

SS

TT
T...........
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   6...10.........20.........30........ .40.........50.........60.........70...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  . . . . . . . . . TSNLDILVCNAGITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYCASKAGLI
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SS







TT








S

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   74.....80.........90.........100.........110.........120.........130.........140....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDG
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Template Sequence  GMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNG
Template Known Secondary structure  GGGT
SB

SS

S

T
TTSS
B
SGGGTT

S
ST
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   242....
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Query Sequence  GFMLA
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Template Conservation 
   
Template Sequence  GMLMV
Template Known Secondary structure  TSS

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   237..240.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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