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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank16Aligned Residues243
% Identity28%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GKIALVTGASYGIGFAIASAYAKAGATIVFNDI. NQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGII
Template Known Secondary structure  T
T
SSTT
S.STT




TT
T


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   14.....20.........30.........40...... ...50.........60.........70.........80.........90..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  DILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSM. IKKGHGKIINICSMMSELGRETVSAYAAAKGGLK
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GGGS
T.T


GGGT


TT
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   93......100.........110.........120.........130....... ..140.........150.........160.........170.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDG
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Template Sequence  MLTKNIASEYGEANIQCNGIGPGYIATPQTHP. . . . FDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHILYVDG
Template Known Secondary structure  GGGT
SB

TT

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TT
S
B
SGGGTT

S
ST
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   172.......180.........190.........200... ......210.........220.........230.........240.......
 
   242... ....250
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Query Sequence  GFML. ANPQF
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Template Sequence  GILAYIGKQP
Template Known Secondary structure  TGGG





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   260.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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