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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank40Aligned Residues244
% Identity24%Templatec3afnC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:carbonyl reductase; PDBTitle: crystal structure of aldose reductase a1-r complexed with nadp
Resolution1.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI
Template Known Secondary structure  T
TT
SSTT
SS

TTTT


TTSSS
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   82.......90.... .....100.........110.........120....... ..130.........140.........150.....
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Query Sequence  DVLVNNAGAMTKA. PFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMV. . . . . KQGQGGRIINITSVHEHTPLPDASAYTA
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Template Sequence  DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGA
Template Known Secondary structure  S









GGG

TTS


T


TT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   156...160.........170.........180.........190.........200.........210.........220........ .230....
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Query Sequence  AKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEG. ANYTTG
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Template Sequence  AKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITG
Template Known Secondary structure  GGGT
SBSSGGGTT

TTSTT
S
B
GGGT
TT

S
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   235....240.....
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Query Sequence  QSLIVDGGFML
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Template Sequence  QVLDINGGQYK
Template Known Secondary structure  STTSS
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   247..250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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