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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank140Aligned Residues234
% Identity23%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GKVALITGASSGIGEATARALAAEGAAVAIAAR. RVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL
Template Known Secondary structure  T
STTSTT
S.
TT



TT
S

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   7..10.........20.........30......... 40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  DILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHLL. . RSKGTVVQXSSIAGRVNVRNAAVYQATKFGVN
Template Known Secondary structure  S








STT

T..T


GGGT


TT
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   86...90.........100.........110.........120.........130. ........140.........150.........160...
 
   162.......170.........180.........190... ......200.........210.........220.........230.........
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMNGM. DDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIV
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Template Sequence  AFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQDIAEAVRYAVT. APHHATVHEIFI
Template Known Secondary structure  GGGT

SB
SSGGGG


TSSS

B
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TT



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   164.....170.........180.........190.........200.........210.........220......... 230.........240.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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