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Job DescriptionP33368
Confidence98.66%DateThu Jan 5 11:52:08 GMT 2012
Rank243Aligned Residues245
% Identity8%Templatec2hrzA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: the crystal structure of the nucleoside-diphosphate-sugar epimerase2 from agrobacterium tumefaciens
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  GXHIAIIGAAGXVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIFHL
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  AAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICE
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   162.......170........ .180.........190.........200.........210.... .....220.........
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Query Sequence  GLTKAMALELVRHKILV. . . NAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGAT. . . . . . . . . HEIASLVVWLCSEGA
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Template Sequence  LLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAXIDV
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   230.........240......
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Query Sequence  NYTTGQSLIVDGGFMLA
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Template Sequence  EKVGPRRNLSXPGLSAT
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   248.250.........260....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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