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Job DescriptionP33368
Confidence99.34%DateThu Jan 5 11:52:08 GMT 2012
Rank213Aligned Residues216
% Identity14%Templatec2gn9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.........70.........
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Query Sequence  AQVAIITASDSGIGKECALLLAQQ. . GFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLG
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Template Sequence  NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR. DELKQSEMAMEFND. . PRMRFFIGDVRDLERLNYALEGVDICIH
Template Known Secondary structure  S
TTTSSB
SS.
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..TT

TT
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Query Sequence  RIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHA
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Template Sequence  AAALKHVP. . . . . . . . . . . . . . . . IAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCS. .
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   87..90.... .....100.........110.........120.........130.........140........
 
   160.........170.........180.........190.........200......... 210.........220.........230.
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Query Sequence  LGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLR. . . . . . . . RFGATHEIASLVVWLCSEGANY
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Template Sequence  . DKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH. .
Template Known Secondary structure  .GGG

SSS




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   149150.........160.........170.........180.........190.........200.........210.........220.....
 
   232.......240..
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Query Sequence  TTGQSLIVDGG
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Template Sequence  . GGEIFVPKIP
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   226...230.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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