Job Description P33368 Confidence 100.00% Date Thu Jan 5 11:52:08 GMT 2012 Rank 130 Aligned Residues 234 % Identity 26% Template c2ekqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-deoxy-d-gluconate 3-dehydrogenase; PDBTitle: structure of tt0495 protein from thermus thermophilus Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	I	I	T	A	S	D	S	G	I	G	K	E	C	A	L	L	L	A	Q	Q	G	F	D	I	G	I	T	W	H	S	D	E	E	G	A	K	D	T	A	R	E	V	V	S	H	G	V	R	A	E	I	V	Q	L	D	L	G	N	L	P	E	G	A	L	A	L	E	K	L	I	Q	R	L	G	R	I	D
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		R	K	A	L	V	T	G	G	S	R	G	I	G	R	A	I	A	E	A	L	V	A	R	G	Y	R	V	A	I	A	S	R	N	P	E	E	A	A	Q	S	L	.	.	.	.	.	.	.	.	.	G	A	V	P	L	P	T	D	L	E	K	D	D	P	K	G	L	V	K	R	A	L	E	A	L	G	G	L	H	V
Template Known Secondary structure								T	T	T	S													T	T								S	S									.	.	.	.	.	.	.	.	.	T								T	T	T	S														T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	N	N	A	G	A	M	T	K	A	P	F	L	D	M	A	F	D	E	W	R	K	I	F	T	V	D	V	D	G	A	F	L	C	S	Q	I	A	A	R	Q	M	V	K	Q	G	Q	G	G	R	I	I	N	I	T	S	V	H	E	H	T	P	L	P	D	A	S	A	Y	T	A	A	K	H	A	L	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	H	A	A	A	V	N	V	R	K	P	A	L	E	L	S	Y	E	E	W	R	R	V	L	Y	L	H	L	D	V	A	F	L	L	A	Q	A	A	A	P	H	M	A	E	A	G	W	G	R	V	L	F	I	G	S	V	T	T	F	T	A	G	G	P	V	P	I	P	A	Y	T	T	A	K	T	A	L	L	G
Template Known Secondary structure														T	T	T														T																		T										G	G	G	T	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		L	T	K	A	M	A	L	E	L	V	R	H	K	I	L	V	N	A	V	A	P	G	A	I	A	T	P	M	N	G	M	.	.	D	D	S	D	V	K	P	D	A	E	P	S	I	P	L	R	R	F	G	A	T	H	E	I	A	S	L	V	V	W	L	C	S	E	G	A	N	Y	T	T	G	Q	S	L	I	V	D
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		L	T	R	A	L	A	K	E	W	A	R	L	G	I	R	V	N	L	L	C	P	G	Y	V	E	T	E	F	T	L	P	L	R	Q	N	P	E	L	Y	E	P	I	T	A	R	I	P	M	G	R	W	A	R	P	E	E	I	A	R	V	A	A	V	L	C	G	D	E	A	E	Y	L	T	G	Q	A	V	A	V	D
Template Known Secondary structure											G	G	G	T										S	B		S	G	G	G					T										T	T		T	T	S	S		B													T	S	G	G	G	T	T			S						S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		241	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	F	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	F	L	A
Template Known Secondary structure		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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