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Job DescriptionP33368
Confidence100.00%DateThu Jan 5 11:52:08 GMT 2012
Rank103Aligned Residues238
% Identity32%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRI
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Template Sequence  DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH. . . . . . . . . . . . DPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSI
Template Known Secondary structure  T
T
SSTT
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   7..10.........20.........30.........40 .........50.........60.........70....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG
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Template Sequence  SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYM. IRSRDPSIVNISSVQASIITKNASAYVTSKHAVI
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B
TTTS
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GGGTS

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   75....80.........90.........100.........110......... 120.........130.........140.........150...
 
   162.......170.........180.........190....... ..200.........210.........220.........230
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Query Sequence  GLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSD. . . . . . . . . . . VKPDAEPSIPLRRFGATHEIASLVVWLCSEGAN
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Template Sequence  GLTKSIALDYAPL. LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREAS
Template Known Secondary structure  TTT.S
SBSS
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B
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   154.....160...... ...170.........180.........190.........200.........210.........220.........230..
 
   231........240.........250...
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Query Sequence  YTTGQSLIVDGGFMLANPQFNPE
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Template Sequence  FITGTCLYVDGGLSIRAPISTPE
Template Known Secondary structure  T

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STTGGG

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   233......240.........250.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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