Job Description P33368 Confidence 98.62% Date Thu Jan 5 11:52:08 GMT 2012 Rank 246 Aligned Residues 214 % Identity 11% Template c2b69A_ PDB info PDB header:lyase Chain: A: PDB Molecule:udp-glucuronate decarboxylase 1; PDBTitle: crystal structure of human udp-glucoronic acid decarboxylase Resolution 1.21 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	A	I	I	T	A	S	D	S	G	I	G	K	E	C	A	L	L	L	A	Q	Q	G	F	D	I	G	I	T	W	H	S	D	E	E	G	A	K	D	T	A	R	E	V	V	S	H	G	V	R	A	E	I	V	Q	L	D	L	G	N	L	P	E	G	A	L	A	L	E	K	L	I	Q	R	L	G	R	I
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	R	I	L	I	T	G	G	A	G	F	V	G	S	H	L	T	D	K	L	X	X	D	G	H	E	V	T	V	V	D	N	F	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	K	R	N	V	E	H	W	I	G	H	E	N	F	E	L	I	N	H
Template Known Secondary structure									T	T	T	S													T	T										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T	G	G	G	T	T		T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	L	V	N	N	A	G	A	M	T	K	A	P	F	L	D	M	A	F	D	E	W	R	K	I	F	T	V	D	V	D	G	A	F	L	C	S	Q	I	A	A	R	Q	M	V	K	Q	G	Q	G	G	R	I	I	N	I	T	S	V	H	E	H	T	P	L	P	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	E	P	L	Y	I	E	V	D	Q	I	Y	H	L	A	S	P	A	S	P	P	N	Y	X	Y	N	P	I	K	T	L	K	T	N	T	I	G	T	L	N	X	L	G	L	A	K	R	V	G	A	R	L	L	L	A	S	T	S	E	V	Y	G	D	P	E	V	H	P	Q	S	E	D	Y	W	G	H	V	N
Template Known Secondary structure			T	T	S							S							S			S					T	T																								T									G	G	G	G	B	S		S	S	S	S	B		T	T				B
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	S	A	Y	T	A	A	K	H	A	L	G	G	L	T	K	A	M	A	L	E	L	V	R	H	K	I	L	V	N	A	V	A	P	G	A	I	A	T	P	M	N	G	M	D	D	S	D	V	K	P	D	A	E	P	S	I	P	L	R	R	F	G	A	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																						.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		P	I	G	P	R	A	C	Y	D	E	G	K	R	V	A	E	T	X	C	Y	A	Y	X	K	Q	.	.	.	E	G	V	E	V	R	V	A	R	I	F	N	T	F	G	P	R	X	H	X	N	D	G	R	V	V	S	N	F	I	L	Q	A	L	Q	G	E	P	L	T	V	Y	G	S	G	S	Q	T	R	A	F	Q
Template Known Secondary structure		S	S	S	T	T																					.	.	.																T	T			T	T															T							S	S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	H	E	I	A	S	L	V	V	W	L	C	S	E	G	A	N	Y	T	T	G	Q	S	L	I	V	D	G	G	F	M	L	A
Query Conservation		.	.
Alig confidence		.	.																.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		Y	V	S	D	L	V	N	G	L	V	A	L	X	N	S	N	V	.	.	.	.	S	S	P	V	N	L	G	N	P	E	E	H	T
Template Known Secondary structure															T	S	S		.	.	.	.		S					S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions