Job Description P33368 Confidence 97.07% Date Thu Jan 5 11:52:08 GMT 2012 Rank 308 Aligned Residues 209 % Identity 9% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	I	I	T	A	S	D	S	G	I	G	K	E	C	A	L	L	L	A	Q	Q	G	F	D	I	G	I	T	W	H	S	D	E	E	G	A	K	D	T	A	R	E	V	V	S	H	G	V	R	A	E	I	V	Q	L	D	L	G	N	L	P	E	G	A	L	A	L	E	K	L	I	Q	R	L	G	R	I	D
Query Conservation
Alig confidence										.																								.
Template Conservation										.																								.
Template Sequence		S	S	V	G	V	L	G	L	.	G	T	M	G	R	G	I	A	I	S	F	A	R	V	G	I	S	V	V	A	V	E	S	.	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	E	L	S	T	V
Template Known Secondary structure										.	S												T	T	T								S	.	S																									T	T												S		G	G	G	G	T	T
Template Predicted Secondary structure										.																								.
Template SS confidence
		297	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		V	L	V	N	N	A	G	A	M	T	K	.	.	.	A	P	F	L	D	M	A	F	D	E	W	R	K	I	F	T	V	D	V	D	G	A	F	L	C	S	Q	I	A	A	R	Q	M	V	K	Q	G	Q	G	G	R	I	I	N	I	T	S	V	H	E	H	T	P	L	P	D	A	S	A	Y	T	A	A	K	H	A
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		D	L	V	V	E	A	V	F	E	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T	H	F	F	S	P	A	H	V	M	R	L	L	E	V	I	P	S	R	Y	S	S	P	T	T
Template Known Secondary structure		S								S																S		T	T								S	S	S							T	T	S	S		G	G	G								S	S	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	L	T	K	A	M	A	L	E	L	V	R	H	K	I	L	V	N	A	V	A	P	G	A	I	A	T	P	M	N	G	M	D	D	S	D	V	K	P	D	A	E	P	S	I	P	L	R	R	F	G	A	T	H	E	I	A	S	L	V
Query Conservation
Alig confidence								.													.																												.	.	.	.	.	.
Template Conservation								.													.																												.	.	.	.	.	.
Template Sequence		I	A	T	V	M	S	.	L	S	K	K	I	G	K	I	G	V	V	V	.	G	N	C	Y	G	F	V	G	N	R	M	L	A	P	Y	Y	N	Q	G	F	F	L	L	E	E	G	S	.	.	.	.	.	.	K	P	E	D	V	D	G	V	L
Template Known Secondary structure								.					T	T						B	.			S	T	T	T	T																		T	T		.	.	.	.	.	.
Template Predicted Secondary structure								.													.																												.	.	.	.	.	.
Template SS confidence
		455	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.							500	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions