Job Description P11880 Confidence 100.00% Date Thu Jan 5 11:33:00 GMT 2012 Rank 19 Aligned Residues 211 % Identity 23% Template d1p3da3 SCOP info Ribokinase-like MurD-like peptide ligases, catalytic domain MurCDEF Resolution 1.70

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	A	A	W	V	R	Q	Q	V	P	A	R	V	V	A	L	T	G	S	S	G	K	T	S	V	K	E	M	T	A	A	I	L	S	Q	C	G	N	T	L	Y	T	A	G	N	L	N	N	D	I	G	V	P	M	T	L	L	R	L	T	P	E	Y	D	Y	A	V	I	E	L	G	A	N	H	Q	G	E	I
Query Conservation
Alig confidence												.	.	.																																				.	.	.																											.	.	.
Template Conservation												.	.	.																																				.	.	.																											.	.	.
Template Sequence		Q	X	L	A	E	I	X	R	F	R	.	.	.	H	G	I	A	V	A	G	T	H	G	K	T	T	T	T	A	X	I	S	X	I	Y	T	Q	A	K	L	D	P	T	F	V	N	G	G	.	.	.	L	V	K	S	A	G	K	N	A	H	L	G	A	S	R	Y	L	I	A	E	A	D	E	S	D	A	.	.	.
Template Known Secondary structure										T	S	.	.	.							S	S	S																T	T										.	.	.			T	T	T	T							S	S	S									T	T	S	.	.	.
Template Predicted Secondary structure												.	.	.																																				.	.	.																											.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		A	W	T	V	S	L	T	R	P	E	A	A	L	V	N	N	L	A	A	A	H	L	E	G	F	.	G	S	L	A	G	V	A	K	A	K	G	E	I	F	S	G	L	P	E	N	G	I	A	I	M	N	A	D	N	N	D	W	L	N	W	Q	S	V	I	G	S	R	K	V	W	R	F	S	P	N	A	A	N	S
Query Conservation																											.
Alig confidence		.	.																								.																																										.									.
Template Conservation		.	.																																																																		.									.
Template Sequence		.	.	S	F	L	H	L	Q	P	X	V	S	V	V	T	N	X	E	P	D	H	X	D	T	Y	E	G	D	F	E	K	X	K	A	T	Y	V	K	F	L	H	N	L	P	F	Y	G	L	A	V	X	C	A	D	D	P	V	L	X	E	L	V	P	K	V	G	R	.	Q	V	I	T	Y	G	F	S	.	E	Q	A
Template Known Secondary structure		.	.	G	G	G	G				S											S	G	G	G	G	T	T														T	T	S		T	T							T	T													S	.							S	S	.	T	T
Template Predicted Secondary structure		.	.																																																																		.									.
Template SS confidence
				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.		.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		D	F	T	A	T	N	I	H	V	T	S	H	G	T	E	F	T	L	Q	T	P	T	.	G	S	V	D	V	L	L	P	L	P	G	R	H	N	I	A	N	A	L	A	A	A	A	L	S	M	S	V	G	A	T	L	D	A	I	K	A	G	L	A	N	L	K
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		D	Y	R	I	E	D	Y	E	Q	T	G	F	Q	G	H	Y	T	V	I	C	P	N	N	E	R	I	N	V	L	L	N	V	P	G	K	H	N	A	L	N	A	T	A	A	L	A	V	A	K	E	E	G	I	A	N	E	A	I	L	E	A	L	A	D	F	Q
Template Known Secondary structure		S										T	T									T	T									S	S		S																	T	T												T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions