Job Description P11880 Confidence 99.70% Date Thu Jan 5 11:33:00 GMT 2012 Rank 29 Aligned Residues 128 % Identity 15% Template d1p3da2 SCOP info MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		312	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.
Predicted Secondary structure											.	.	.	.																														.																																	.	.
Query SS confidence											.	.	.	.																														.																																	.	.
Query Sequence		A	V	P	G	R	L	F	P	I	.	.	.	.	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V	L	A	E	.	M	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	.	.	A	G	I
Query Conservation											.	.	.	.																														.																																	.	.
Alig confidence											.	.	.	.												.																		.											.	.	.	.	.																		.	.
Template Conservation																										.																													.	.	.	.	.
Template Sequence		G	A	G	R	R	F	D	Q	L	G	E	F	I	R	P	N	G	K	V	R	L	V	D	D	.	Y	G	H	H	P	T	E	V	G	V	T	I	K	A	A	R	E	G	W	G	D	K	R	I	V	X	I	F	.	.	.	.	.	Q	P	H	R	Y	S	R	T	R	D	L	F	D	D	F	V	Q	V	L	S	Q	V
Template Known Secondary structure				T	T	S	S									T	T									.				S																	S	S							.	.	.	.	.			B								T									T	T	S
Template Predicted Secondary structure																										.																													.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.						.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.																	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	V	L	S	V	G	K	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	M	E	E	V	V	R	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	L	I	X	L	D	V	Y	A	A	G	E	A	P	I	V	G	A	D	S	K	S	L	C	R	S	I	R	N	L	G	K	V	D	P	I	L	V	S	D	T	S	Q	L	G	D	V	L	D	Q	I	I	Q	D	G	D	L	I	L	A	Q	G	A	G	S	V	S	K	I	S	R	G	L	A	E	S
Template Known Secondary structure		S								B		T	T					T	T		S												T	S							S		G	G	G											T	T								S	S	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions