Return to main results Retrieve Phyre Job Id

Job DescriptionP11880
Confidence99.43%DateThu Jan 5 11:33:00 GMT 2012
Rank32Aligned Residues119
% Identity16%Templated1o5za1
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain Folylpolyglutamate synthetase, C-terminal domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   315....320.........330.........340......... 350.........360.........370.........380.........390...
Predicted Secondary structure 








.
















Query SS confidence 


































.











































Query Sequence  GRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAE. MPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQ
Query Conservation 

 
 
       

 
 




 
    
  
  .     
 


   
 
         
         
 
   
  
Alig confidence 






.








.
















.









.....

















.









Template Conservation 

 
 
 .     



. 



 

  
   
        
  
 .....
   


    
  
   .   
      
Template Sequence  GRFEILE. KNGKMYILD. GAHNPHGAESLVRSLKLYFNGEPLSLVI. . . . . GILDDKNREDILRKYTGI. FERVIVTRVP
Template Known Secondary structure 

S.TT
.


S
TT

.....


TTS
GGGTTT.
S


S
Template Predicted Secondary structure 


.



.








.....





.




Template SS confidence 















































































   294.....300 ......... 310.........320.........330....... ..340.........350..... ....360.....
 
   394.....400.........410.........420.........430.........440.........450
Predicted Secondary structure  ..........















Query SS confidence  . . . . . . . . . .
























































Query Sequence  . . . . . . . . . . SHAISTASGVGEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQENG
Query Conservation  ..........   
               

          
   





    

 

  
 
  
Alig confidence  ..........





















......



..









.











Template Conservation    
      
                   

 ......    .. 


 




.

     
   
Template Sequence  SPRMKDMNSLVDMAKKFFKNVEVIEDPLEAIE. . . . . . STER. . ATVVTGSLFL. VGYVREFLTTGK
Template Known Secondary structure  STT



S


SS......T

S..S
.SS
Template Predicted Secondary structure 











......



..

.


Template SS confidence 


































































   366...370.........380.........390....... ..400. ........410. ........420...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions