 |
Job Description | P11880 | Confidence | 74.81% | Date | Thu Jan 5 11:33:00 GMT 2012 |
Rank | 178 | Aligned Residues | 93 |
% Identity | 15% | Template | d1ko7a1 |
SCOP info | MurF and HprK N-domain-like
| HprK N-terminal domain-like
| HPr kinase/phoshatase HprK N-terminal domain
|
Resolution | 1.95 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
M | I | S | V | T | L | S | Q | L | T | D | I | L | N | G | E | L | Q | . |
. |
. |
. |
G | A | D | I | T | L | D | A | V | T | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | R | K | L | T | P | G | C | L | F | V | A | L | K | G | E | R | F | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | D | F | A | D | Q | A |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   | . | . | . | . |
|   |
|   |   |
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
Alig confidence |   |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . |
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   | . | . |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
M | L | . |
. |
T | T | K | S | L | V | E | R | F | E | L | E | M | I | A | G | E | A | G | L | N | K | Q | I | K | N | T | D | I | S | R | P | G | L | E | M | A | G | Y | F | S | H | Y | A | S | D | R | I | Q | L | L | . |
. |
G | T | T | E | L | S | F | Y | N | L | L | P | D | E | E | R | K | G | R | M | R | K | L |
Template Known Secondary structure |   |
|
| . | . | B |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| G | G | G | T | T |
| B |
|
|
| S |
|  |  |
|
|  |  |  |  | T | T |
|
| T | T |
|
| T | T | S |  |  |  |  | . | . |
|  |  |  |  |  |  |  |  |  | S |
|  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | |
|
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | G | G | A | G | A | L | L | V | S | R | P | L | D | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | P | Q | L | I | V | K | D | T | R | L | A | F | G | E | L | A | A | W | V | R | Q | Q |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
C | R | P | E | T | P | A | I | I | V | T | R | D | L | E | P | P | E | E | L | I | E | A | A | K | E | H | E | T | P | L | I | T | S | K | I | A | T | T | Q | L | M | S | R | L | T | T | F | L | E | H |
Template Known Secondary structure |   |
|
| T | T |
|
|
|  |  |  |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|