Job Description P11880 Confidence 99.58% Date Thu Jan 5 11:33:00 GMT 2012 Rank 31 Aligned Residues 124 % Identity 15% Template d1j6ua2 SCOP info MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain Resolution 2.30

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		312	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																												.
Query SS confidence													.	.																												.
Query Sequence		A	V	P	G	R	L	F	P	I	Q	L	.	.	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V	L	A	E	.	M	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L
Query Conservation													.	.																												.
Alig confidence													.	.										.																		.											.	.	.	.	.												.	.	.	.	.	.
Template Conservation																								.																													.	.	.	.	.												.	.	.	.	.	.
Template Sequence		G	V	H	R	R	F	S	I	A	F	H	D	P	E	T	N	I	Y	V	I	D	D	.	Y	A	H	T	P	D	E	I	R	N	L	L	Q	T	A	K	E	V	F	E	N	E	K	I	V	V	I	F	.	.	.	.	.	Q	P	H	R	G	N	F	A	K	A	L	.	.	.	.	.	.	Q	L	A	D	E	V	V
Template Known Secondary structure				T	T	S	S							T	T	T	T							.				S																S	S	S							.	.	.	.	.			B									.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																								.																													.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.						.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.
		389	390	.	.	.	.							.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		S	V	G	K	Q	S	.	.	.	.	.	.	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	M	E	E	V	V	R	A	L	Q	E	N
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																									.	.
Template Conservation																																						.	.
Template Sequence		V	T	E	V	Y	D	S	G	K	X	I	W	D	S	L	K	S	L	G	K	E	A	Y	F	V	E	K	L	P	E	L	E	K	V	I	S	.	.	V	S	E	N	T	V	F	L	F	V	G	A	G	D	I	I	Y	S	S	R	R	F	V	E	R	Y	Q	S	S
Template Known Secondary structure						B													T	T								S	G	G	G							.	.			S	S								S	S	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions