Job Description P11880 Confidence 99.72% Date Thu Jan 5 11:33:00 GMT 2012 Rank 28 Aligned Residues 134 % Identity 15% Template d1e8ca2 SCOP info MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain Resolution 2.00

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		V	P	G	R	L	F	P	I	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V	L	A	E	M	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L	S	V	.	.
Query Conservation																																																																																.	.
Alig confidence																					.																														.	.																				.								.	.
Template Conservation																					.																														.	.																				.
Template Sequence		V	C	G	R	X	E	V	F	T	A	P	G	K	P	T	V	V	V	D	.	Y	A	H	T	P	D	A	L	E	K	A	L	Q	A	A	R	L	H	C	A	G	K	L	W	C	V	F	G	C	.	.	G	G	D	R	D	K	G	K	R	P	L	X	G	A	I	A	E	E	F	.	A	D	V	A	V	V	T	D	D
Template Known Secondary structure			T	T	S	S						T	T	S							.				S														T		S	S									.	.		S	S	S		S	T													.		S							S
Template Predicted Secondary structure																					.																														.	.																				.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.
					391	.	.	.	.	.	.	.	.								400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.															.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.	.										.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.										.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	G	K	Q	S	H	A	I	S	T	.	.	.	.	.	.	.	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	E	E	V	V	R	A	L
Query Conservation		.	.	.										.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.										.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	R	T	E	E	P	R	A	I	I	N	D	I	L	A	G	X	L	D	A	G	H	A	K	V	X	E	G	R	A	E	A	V	T	C	A	V	X	Q	A	K	E	N	D	V	V	L	V	A	G	K	G	H	E	D	Y	Q	I	V	G	N	Q	R	L	D	Y	S	D	R	V	T	V	A	R	L	L	G	V	I
Template Known Secondary structure				B	T	S											T	T	S	S		G	G	G	S				S													S		T	T							S		T	T							T	T																T	S
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		447	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	S	H
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions