Job Description P11880 Confidence 22.78% Date Thu Jan 5 11:33:00 GMT 2012 Rank 349 Aligned Residues 78 % Identity 14% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.										.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L	S	V	G	.	.	.	.	.	.	.	.	.	K	Q	S	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	M	E	E	V	V
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	I	E	A	A	V	E	A	I	R	A	D	H	V	I	V	V	G	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	I	R	T	T	V	L	T	E	G	G	S	T	L	T	I	T	L	A	N	L	R	P	T	D	L	X	I	G	V	S	V	W	R	Y	L	R	D	T	V	A	A	L
Template Known Secondary structure														S								G	G	G														T	T										T									T			T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		444	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	Q	E	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	A	E	R	G
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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