Job Description P11880 Confidence 100.00% Date Thu Jan 5 11:33:00 GMT 2012 Rank 15 Aligned Residues 327 % Identity 17% Template c3n2aA_ PDB info PDB header:ligase Chain: A: PDB Molecule:bifunctional folylpolyglutamate synthase/dihydrofolate PDBTitle: crystal structure of bifunctional folylpolyglutamate2 synthase/dihydrofolate synthase from yersinia pestis co92 Resolution 1.90 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	L	A	A	W	V	R	Q	Q	V	P	A	R	V	V	A	L	T	G	S	S	G	K	T	S	V	K	E	M	T	A	A	I	L	S	Q	C	G	N	T	L	Y	T	A	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	A	E	R	L	D	L	L	K	P	A	P	K	I	F	T	V	A	G	T	N	G	K	G	T	T	C	C	T	L	E	A	I	L	L	A	A	G	L	R	V	G	V	Y	S	S	P	H	L	L	R	Y	T	E	R	V	R	I	Q	G	Q	E	L	S	E	A	E	H	S	H	S	F	A	Q	I	E	A	G	R
Template Known Secondary structure								T		S		S	S	S								S	S																T	T									S		S	S		G	G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
				135	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.															.	.	.	.																																														.
Query SS confidence		.	.															.	.	.	.																																														.
Query Sequence		.	.	L	N	N	D	I	G	V	P	M	T	L	L	R	L	.	.	.	.	T	P	E	Y	D	Y	A	V	I	E	L	G	A	N	H	Q	G	E	I	A	W	T	V	S	L	T	R	P	E	A	A	L	V	N	N	L	A	A	A	H	L	E	G	F	G	.	S	L	A	G	V	A	K	A	K	G	E	I	F	S
Query Conservation		.	.															.	.	.	.																																														.
Alig confidence		.	.															.	.	.	.																			.	.	.																									.														.
Template Conservation																																								.	.	.																																							.
Template Sequence		G	D	I	S	L	T	Y	F	E	F	G	T	L	S	A	L	Q	L	F	K	Q	A	K	L	D	V	V	I	L	E	V	G	L	G	G	R	L	D	.	.	.	A	T	N	I	V	D	S	D	V	A	A	I	T	S	I	A	L	D	H	T	D	W	L	G	Y	D	R	E	S	I	G	R	E	K	A	G	V	F	.
Template Known Secondary structure		T	T																				T	T		S							S	S	S	S	T	T	S	.	.	.	G	G	G	G	S			S											S	S			T	T		S										T	T		.
Template Predicted Secondary structure																																								.	.	.																																							.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	E	N	G	I	A	I	M	N	A	D	N	N	D	W	L	N	W	Q	S	V	I	G	S	R	K	V	W	R	F	S	P	N	A	A	N	S	D	F	T	A	T	N	I	H	V	T	S	H	G	T	E	F	T	L	Q	T	P	T	G	S	V	D	V	L	L	P	L	P	G	R	H	N	I	A	N	A	L
Query Conservation
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation		.	.																									.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		.	.	R	G	G	K	P	A	V	V	G	E	P	D	M	P	Q	S	I	A	D	V	A	A	E	L	.	.	.	.	.	.	.	.	.	.	.	G	A	Q	L	Y	R	R	D	V	A	W	K	F	S	Q	N	G	W	H	W	Q	C	.	.	G	E	R	Q	L	T	G	L	P	V	P	N	V	P	L	A	N	A	A
Template Known Secondary structure		.	.		T	T	S							S	S													.	.	.	.	.	.	.	.	.	.	.	T						B	T	T	T													.	.	T	T										S	S
Template Predicted Secondary structure		.	.																									.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
				193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	A	L	S	M	S	V	G	A	T	L	D	A	I	K	A	G	L	A	N	L	K	A	V	P	G	R	L	F	P	I	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V	L	A	E	M	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E
Query Conservation
Alig confidence																																													.	.																										.	.	.	.	.	.	.
Template Conservation																																													.	.																										.	.	.	.	.	.	.
Template Sequence		T	A	L	A	V	L	H	Y	S	E	L	P	L	S	D	E	A	I	R	Q	G	L	Q	A	A	S	L	P	G	R	F	Q	V	V	S	E	Q	P	L	L	I	L	D	.	.	V	A	H	N	P	H	A	A	R	Y	L	V	N	R	L	A	Q	V	G	K	V	R	A	V	V	.	.	.	.	.	.	.	G	M	L
Template Known Secondary structure											T																		T	T	S	S					T	T	T						.	.				S													T									.	.	.	.	.	.	.			B
Template Predicted Secondary structure																																													.	.																										.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.								340	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L	S	V	.	.	.	.	.	.	G	K	Q	S	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	M	E	E
Query Conservation																									.	.	.	.	.	.
Alig confidence																	.								.	.	.	.	.	.																																				.	.											.
Template Conservation																	.																																																	.	.											.
Template Sequence		S	D	K	D	I	A	G	T	L	A	C	L	S	E	R	.	V	D	E	W	Y	C	A	P	L	E	G	P	R	G	A	S	A	G	Q	L	A	E	H	L	V	S	A	R	Q	F	S	D	V	E	T	A	W	R	Q	A	M	Q	D	A	D	T	Q	D	.	.	V	V	I	V	C	G	S	F	H	T	.	V	A	H
Template Known Secondary structure		T	T	S										T	T	T	.		S									T	T	T	B								T	T		S	S					S	S														T	T		.	.						S	S				.
Template Predicted Secondary structure																	.																																																	.	.											.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.		.	.	.
		442	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	A	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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