Job Description P11880 Confidence 99.69% Date Thu Jan 5 11:33:00 GMT 2012 Rank 30 Aligned Residues 118 % Identity 17% Template c3mvnA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp Resolution 1.90 Å

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		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		R	L	F	P	I	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V	L	A	E	M	.	.	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L	S	V	G	K	Q
Query Conservation																																					.	.
Alig confidence																		.																			.	.												.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																		.																																.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		R	L	E	V	K	G	V	V	N	N	I	T	V	Y	D	D	.	F	A	H	H	P	T	A	I	T	A	T	I	D	A	L	R	A	K	V	G	Q	Q	R	I	L	A	V	L	E	P	R	.	.	.	.	.	.	.	.	.	.	.	K	H	E	L	A	T	S	L	Q	D	.	A	D	S	V	F	I	Y	Q	P	W
Template Known Secondary structure										T	T							.				S																T	T	S										.	.	.	.	.	.	.	.	.	.	.									T	T	.		S
Template Predicted Secondary structure																		.																																.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.												.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.
		394			.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		S	.	.	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	M	E	E	V	V	R	A	L
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		Q	V	S	E	V	L	A	N	L	A	Q	P	A	I	S	A	D	D	V	D	E	L	V	X	R	I	V	Q	Q	A	K	P	N	D	H	I	L	I	X	S	N	G	A	F	G	G	I	H	Q	K	L	L	T	A	L
Template Known Secondary structure								T	T			S						S	S														T	T								S	S		G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions