Job Description P11880 Confidence 98.28% Date Thu Jan 5 11:33:00 GMT 2012 Rank 35 Aligned Residues 94 % Identity 20% Template c3eh0C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n- PDBTitle: crystal structure of lpxd from escherichia coli Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.
Predicted Secondary structure																						.																																																					.	.
Query SS confidence																						.																																																					.	.
Query Sequence		M	I	S	V	T	L	S	Q	L	T	D	I	L	N	G	E	L	Q	G	A	.	D	I	T	L	D	A	V	T	T	D	T	R	K	L	T	P	G	C	L	F	V	A	L	K	G	E	R	F	D	A	H	D	F	A	D	Q	A	K	A	G	G	A	G	A	L	L	V	S	R	P	L	D	.	.	I	D	L	P	Q
Query Conservation																						.																																																					.	.
Alig confidence																						.									.														.	.	.	.	.	.																									.	.
Template Conservation																															.														.	.	.	.	.	.
Template Sequence		M	A	S	I	R	L	A	D	L	A	Q	Q	L	D	A	E	L	H	G	D	G	D	I	V	I	T	G	V	A	.	S	M	Q	S	A	Q	T	G	H	I	T	F	M	.	.	.	.	.	.	V	N	P	K	Y	R	E	H	L	G	L	C	Q	A	S	A	V	V	M	T	Q	D	D	L	P	F	A	K	S	A	A
Template Known Secondary structure														T	T					S		S									.		T	T	T			T	T						.	.	.	.	.	.			G	G	G	G	T	T	G	G	G				S						S	T	T	G	G	G		S	S
Template Predicted Secondary structure																															.														.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	K	D	T	R	L	A	F	G	E	L	A	A	W	V	R	Q	Q	V	P	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	V	K	N	P	Y	L	T	Y	A	R	M	A	Q	I	L	D	T	T	P	Q	P	A
Template Known Secondary structure					S													T						S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions