Return to main results Retrieve Phyre Job Id

Job DescriptionP11880
Confidence85.33%DateThu Jan 5 11:33:00 GMT 2012
Rank123Aligned Residues92
% Identity17%Templatec2gzaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:type iv secretion system protein virb11; PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  TRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGAN
Query Conservation     

  

          

 



 




   
  

   
      
  
  

   
        
  
 
 
  
Alig confidence 

























.





























.........













Template Conservation        

         


 
 


.





 


  
    






  

 
.........              
Template Sequence  AGDYMSFLRRAVQLERVIVVAGETGS. GKTTLMKALMQEIPFDQRLITIEDVPELFL. . . . . . . . . PDHPNHVHLFYPPV
Template Known Secondary structure  T
TT

STTS.STTS
TTS
SSS



.........TT
SS



Template Predicted Secondary structure 







.









.........









Template SS confidence 















































































   161........170.........180...... ...190.........200.........210...... ...220.........230
 
   163......170.........180....
Predicted Secondary structure 









Query SS confidence 





















Query Sequence  HQGEIAWTVSLTRPEAALVNNL
Query Conservation               








Alig confidence 





















Template Conservation       
   

  

 





Template Sequence  TAATLLRSCLRMKPTRILLAEL
Template Known Secondary structure 
TTS

SS

Template Predicted Secondary structure 






Template SS confidence 





















   240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions