Job Description P11880 Confidence 100.00% Date Thu Jan 5 11:33:00 GMT 2012 Rank 13 Aligned Residues 337 % Identity 21% Template c2gc6A_ PDB info PDB header:ligase Chain: A: PDB Molecule:folylpolyglutamate synthase; PDBTitle: s73a mutant of l. casei fpgs Resolution 1.90 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	D	T	R	L	A	F	G	E	L	A	A	W	V	R	Q	Q	V	P	A	R	V	V	A	L	T	G	S	S	G	K	T	S	V	K	E	M	T	A	A	I	L	S	Q	C	G	N	T	L	Y	T	A	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	D	H	R	R	I	L	T	L	L	H	A	L	G	N	P	Q	Q	Q	G	R	Y	I	H	V	T	G	T	N	G	K	G	S	A	A	N	A	I	A	H	V	L	E	A	S	G	L	T	V	G	L	Y	T	A	P	F	I	M	R	F	N	E	R	I	M	I	D	H	E	P	I	P	D	A	A	L	V	N	A
Template Known Secondary structure															T	T		G	G	G	S	S								S	S	S															T	T								S	S		S	S		G	G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
													135	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	N	N	D	I	G	V	P	M	T	L	L	R	.	.	.	.	.	.	.	.	.	.	L	T	P	E	Y	D	Y	A	V	I	E	L	G	A	N	H	Q	G	E	I	A	W	T	V	S	L	T	R	P	E	A	A	L	V	N	N	L	A	A	A	H	L	E	G	F	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																							.	.	.
Template Sequence		V	A	F	V	R	A	A	L	E	R	L	Q	Q	Q	Q	A	D	F	N	V	T	E	F	E	F	I	T	A	L	G	Y	W	Y	F	R	Q	R	Q	V	D	V	A	V	I	E	V	G	I	G	G	D	T	D	.	.	.	S	T	N	V	I	T	P	V	V	S	V	L	T	E	V	A	L	D	H	Q	K	L	L	G
Template Known Secondary structure																S	T	T																				T	T		S							S	S	S	S	T	T	S	.	.	.	T	T		S				S									S	T	T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		S	L	A	G	V	A	K	A	K	G	E	I	F	S	G	L	P	E	N	G	I	A	I	M	N	A	D	N	N	D	W	L	N	W	Q	S	V	I	G	S	R	K	V	W	R	F	S	P	N	A	A	N	S	D	F	T	A	T	N	I	H	V	T	S	H	G	T	E	F	T	L	Q	T	P	T	G	S	V	.	D
Query Conservation																																																																																.
Alig confidence															.	.	.																																				.	.																										.
Template Conservation															.	.	.																																				.	.
Template Sequence		H	T	I	T	A	I	A	K	H	A	G	I	I	.	.	.	K	R	G	I	P	V	V	T	G	N	L	V	P	D	A	A	A	V	V	A	A	K	V	A	T	T	G	S	Q	W	L	R	F	D	R	.	.	D	F	S	V	P	K	A	K	L	H	G	W	G	Q	R	F	T	Y	E	D	Q	D	G	R	I	S	D
Template Known Secondary structure		S	S									T	T		.	.	.		T	T																								T						B	T	T	.	.	T										S	S	S								T	T
Template Predicted Secondary structure															.	.	.																																				.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		V	L	L	P	L	P	G	R	H	N	I	A	N	A	L	A	A	A	A	L	S	M	S	V	G	.	.	.	.	.	.	A	T	L	D	A	I	K	A	G	L	A	N	L	K	A	V	P	G	R	L	F	P	I	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.															.										.	.									.
Template Conservation																																															.										.	.									.
Template Sequence		L	E	V	P	L	V	G	D	Y	Q	Q	R	N	M	A	I	A	I	Q	T	A	K	V	Y	A	K	Q	T	E	W	P	L	T	P	Q	N	I	R	Q	G	L	A	A	S	H	.	W	P	A	R	L	E	K	I	S	.	.	D	T	P	L	I	V	I	D	.	G	A	H	N	P	D	G	I	N	G	L	I	T	A
Template Known Secondary structure					S			S																					T	T																	.		T	T	S	S					.	.	T	T	T	T					.				S
Template Predicted Secondary structure																																															.										.	.									.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	M	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L	S	V	G	K	Q	S	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V
Query Conservation
Alig confidence															.	.	.	.	.														.	.	.	.	.											.	.	.	.	.																									.				.
Template Conservation															.	.	.	.	.														.	.	.	.	.											.	.	.	.	.																									.				.
Template Sequence		L	K	Q	L	F	S	Q	P	I	T	V	I	A	.	.	.	.	.	G	I	L	Y	A	A	M	A	D	R	L	T	A	.	.	.	.	.	A	F	S	T	V	Y	L	V	P	V	.	.	.	.	.	P	G	T	P	R	A	L	R	L	K	D	S	W	Q	E	A	L	A	A	S	L	N	D	V	.	P	D	Q	.
Template Known Secondary structure							S	S							.	.	.	.	.						S	S	S	S	T	T	T	T	.	.	.	.	.	T		S								.	.	.	.	.	T	T	S						B		S														.	T	T	S	.
Template Predicted Secondary structure															.	.	.	.	.														.	.	.	.	.											.	.	.	.	.																									.				.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	I	L	V	K	G	S	R	S	A	A	M	E	E	V	V	R	A	L	Q
Query Conservation
Alig confidence		.											.
Template Conservation		.											.
Template Sequence		.	P	I	V	I	T	G	S	L	Y	L	.	A	S	A	V	R	Q	T	L	L
Template Known Secondary structure		.						S					.
Template Predicted Secondary structure		.											.
Template SS confidence
			406	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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